Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMOQ99835 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
SMOQ99835 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SMOQ99835 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.59■□□□□ 0.89
SMOQ99835 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMOQ99835 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SMOQ99835 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.59■□□□□ 0.89
SMOQ99835 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 KSR1P1-201ENST00000446298 240 ntBASIC20.59■□□□□ 0.89
SMOQ99835 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.59■□□□□ 0.89
SMOQ99835 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SMOQ99835 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.59■□□□□ 0.89
SMOQ99835 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.59■□□□□ 0.89
SMOQ99835 HLA-A-209ENST00000638375 975 ntBASIC20.59■□□□□ 0.89
SMOQ99835 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMOQ99835 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.59■□□□□ 0.89
SMOQ99835 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.59■□□□□ 0.89
SMOQ99835 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SMOQ99835 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMOQ99835 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.58■□□□□ 0.89
SMOQ99835 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SMOQ99835 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.58■□□□□ 0.89
SMOQ99835 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SMOQ99835 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SMOQ99835 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMOQ99835 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.58■□□□□ 0.89
SMOQ99835 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.58■□□□□ 0.89
SMOQ99835 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.58■□□□□ 0.89
SMOQ99835 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.58■□□□□ 0.89
SMOQ99835 CR392000.1-201ENST00000624770 1228 ntBASIC20.58■□□□□ 0.89
SMOQ99835 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.58■□□□□ 0.89
SMOQ99835 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMOQ99835 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMOQ99835 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
SMOQ99835 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.58■□□□□ 0.88
SMOQ99835 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMOQ99835 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMOQ99835 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMOQ99835 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.58■□□□□ 0.88
SMOQ99835 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.58■□□□□ 0.88
SMOQ99835 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMOQ99835 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMOQ99835 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.58■□□□□ 0.88
SMOQ99835 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.58■□□□□ 0.88
SMOQ99835 AC073130.3-201ENST00000624389 2278 ntBASIC20.57■□□□□ 0.88
SMOQ99835 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMOQ99835 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SMOQ99835 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMOQ99835 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMOQ99835 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMOQ99835 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMOQ99835 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMOQ99835 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMOQ99835 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMOQ99835 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.57■□□□□ 0.88
SMOQ99835 AL445675.2-201ENST00000620291 557 ntBASIC20.57■□□□□ 0.88
SMOQ99835 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMOQ99835 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMOQ99835 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMOQ99835 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMOQ99835 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.56■□□□□ 0.88
SMOQ99835 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMOQ99835 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMOQ99835 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMOQ99835 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.56■□□□□ 0.88
SMOQ99835 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMOQ99835 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMOQ99835 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.56■□□□□ 0.88
SMOQ99835 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.56■□□□□ 0.88
SMOQ99835 AC026471.5-201ENST00000615068 467 ntBASIC20.56■□□□□ 0.88
SMOQ99835 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMOQ99835 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.56■□□□□ 0.88
SMOQ99835 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.56■□□□□ 0.88
SMOQ99835 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms