Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 KRT8P20-201ENST00000423953 1409 ntBASIC18.48■□□□□ 0.55
COL21A1Q96P44 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.47■□□□□ 0.55
COL21A1Q96P44 TREX1-205ENST00000625293 1783 ntBASIC18.47■□□□□ 0.55
COL21A1Q96P44 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.47■□□□□ 0.55
COL21A1Q96P44 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
COL21A1Q96P44 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.47■□□□□ 0.55
COL21A1Q96P44 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.47■□□□□ 0.55
COL21A1Q96P44 AL390719.1-204ENST00000412397 1219 ntBASIC18.47■□□□□ 0.55
COL21A1Q96P44 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.47■□□□□ 0.55
COL21A1Q96P44 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.47■□□□□ 0.55
COL21A1Q96P44 RNA5SP413-201ENST00000516373 109 ntBASIC18.47■□□□□ 0.55
COL21A1Q96P44 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.47■□□□□ 0.55
COL21A1Q96P44 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL21A1Q96P44 AC009237.14-201ENST00000609975 1594 ntBASIC18.47■□□□□ 0.55
COL21A1Q96P44 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.46■□□□□ 0.55
COL21A1Q96P44 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 PNMA6B-201ENST00000538162 1200 ntBASIC18.46■□□□□ 0.55
COL21A1Q96P44 AC005829.2-201ENST00000571422 1056 ntBASIC18.46■□□□□ 0.55
COL21A1Q96P44 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
COL21A1Q96P44 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL21A1Q96P44 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.46■□□□□ 0.54
COL21A1Q96P44 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.45■□□□□ 0.54
COL21A1Q96P44 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL21A1Q96P44 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms