Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX27Q96L92 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX27Q96L92 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX27Q96L92 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
SNX27Q96L92 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.17■□□□□ 0.98
SNX27Q96L92 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SNX27Q96L92 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.17■□□□□ 0.98
SNX27Q96L92 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX27Q96L92 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX27Q96L92 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
SNX27Q96L92 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
SNX27Q96L92 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX27Q96L92 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SNX27Q96L92 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX27Q96L92 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SNX27Q96L92 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 KRT8P8-201ENST00000434750 1448 ntBASIC21.16■□□□□ 0.98
SNX27Q96L92 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SNX27Q96L92 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX27Q96L92 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.16■□□□□ 0.98
SNX27Q96L92 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX27Q96L92 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX27Q96L92 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX27Q96L92 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.16■□□□□ 0.98
SNX27Q96L92 PKD1P6-201ENST00000343738 4769 ntBASIC21.16■□□□□ 0.98
SNX27Q96L92 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX27Q96L92 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX27Q96L92 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SNX27Q96L92 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
SNX27Q96L92 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX27Q96L92 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX27Q96L92 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX27Q96L92 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX27Q96L92 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX27Q96L92 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.15■□□□□ 0.98
SNX27Q96L92 HLA-A-209ENST00000638375 975 ntBASIC21.15■□□□□ 0.98
SNX27Q96L92 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SNX27Q96L92 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX27Q96L92 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX27Q96L92 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SNX27Q96L92 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX27Q96L92 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX27Q96L92 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX27Q96L92 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SNX27Q96L92 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX27Q96L92 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.14■□□□□ 0.98
SNX27Q96L92 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX27Q96L92 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX27Q96L92 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SNX27Q96L92 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SNX27Q96L92 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX27Q96L92 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.14■□□□□ 0.97
SNX27Q96L92 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SNX27Q96L92 AC012306.2-201ENST00000609350 630 ntBASIC21.14■□□□□ 0.97
SNX27Q96L92 REXO1L10P-201ENST00000615707 1290 ntBASIC21.14■□□□□ 0.97
SNX27Q96L92 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SNX27Q96L92 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SNX27Q96L92 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SNX27Q96L92 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNX27Q96L92 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNX27Q96L92 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNX27Q96L92 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.13■□□□□ 0.97
SNX27Q96L92 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX27Q96L92 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SNX27Q96L92 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SNX27Q96L92 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNX27Q96L92 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.13■□□□□ 0.97
SNX27Q96L92 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
SNX27Q96L92 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX27Q96L92 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX27Q96L92 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX27Q96L92 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.13■□□□□ 0.97
SNX27Q96L92 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SNX27Q96L92 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms