Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRCH3Q96II8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRCH3Q96II8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LRCH3Q96II8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRCH3Q96II8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRCH3Q96II8 AC096733.2-201ENST00000609937 1394 ntBASIC21.25■□□□□ 0.99
LRCH3Q96II8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRCH3Q96II8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRCH3Q96II8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRCH3Q96II8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.25■□□□□ 0.99
LRCH3Q96II8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LRCH3Q96II8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.25■□□□□ 0.99
LRCH3Q96II8 AL023803.3-201ENST00000615559 522 ntBASIC21.25■□□□□ 0.99
LRCH3Q96II8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRCH3Q96II8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.25■□□□□ 0.99
LRCH3Q96II8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRCH3Q96II8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRCH3Q96II8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRCH3Q96II8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LRCH3Q96II8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRCH3Q96II8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.25■□□□□ 0.99
LRCH3Q96II8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LRCH3Q96II8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRCH3Q96II8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.24■□□□□ 0.99
LRCH3Q96II8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH3Q96II8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH3Q96II8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.23■□□□□ 0.99
LRCH3Q96II8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH3Q96II8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH3Q96II8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.23■□□□□ 0.99
LRCH3Q96II8 YBX1P10-201ENST00000444752 975 ntBASIC21.23■□□□□ 0.99
LRCH3Q96II8 SLC25A6P4-201ENST00000586535 553 ntBASIC21.23■□□□□ 0.99
LRCH3Q96II8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.23■□□□□ 0.99
LRCH3Q96II8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
LRCH3Q96II8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH3Q96II8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.23■□□□□ 0.99
LRCH3Q96II8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH3Q96II8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH3Q96II8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH3Q96II8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH3Q96II8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH3Q96II8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH3Q96II8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.22■□□□□ 0.99
LRCH3Q96II8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.22■□□□□ 0.99
LRCH3Q96II8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.22■□□□□ 0.99
LRCH3Q96II8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.22■□□□□ 0.99
LRCH3Q96II8 AC120114.3-201ENST00000611923 658 ntBASIC21.22■□□□□ 0.99
LRCH3Q96II8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.22■□□□□ 0.99
LRCH3Q96II8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LRCH3Q96II8 AC022898.2-201ENST00000616822 1312 ntBASIC21.22■□□□□ 0.99
LRCH3Q96II8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LRCH3Q96II8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LRCH3Q96II8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.21■□□□□ 0.99
LRCH3Q96II8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.21■□□□□ 0.99
LRCH3Q96II8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
LRCH3Q96II8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRCH3Q96II8 AL732292.2-201ENST00000609649 430 ntBASIC21.21■□□□□ 0.99
LRCH3Q96II8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRCH3Q96II8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH3Q96II8 KRT8P8-201ENST00000434750 1448 ntBASIC21.21■□□□□ 0.99
LRCH3Q96II8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.2■□□□□ 0.98
LRCH3Q96II8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LRCH3Q96II8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LRCH3Q96II8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.2■□□□□ 0.98
LRCH3Q96II8 SPDYE13P-201ENST00000445314 798 ntBASIC21.2■□□□□ 0.98
LRCH3Q96II8 TSPY17P-201ENST00000450329 467 ntBASIC21.2■□□□□ 0.98
LRCH3Q96II8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.2■□□□□ 0.98
LRCH3Q96II8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms