Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 AL135905.2-201ENST00000584934 1404 ntBASIC17.37■□□□□ 0.37
APH1AQ96BI3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.36■□□□□ 0.37
APH1AQ96BI3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APH1AQ96BI3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
APH1AQ96BI3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 MIR718-201ENST00000390190 70 ntBASIC17.35■□□□□ 0.37
APH1AQ96BI3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 RARRES2P10-201ENST00000564312 460 ntBASIC17.35■□□□□ 0.37
APH1AQ96BI3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 AC066615.1-201ENST00000640911 628 ntBASIC17.35■□□□□ 0.37
APH1AQ96BI3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
APH1AQ96BI3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
APH1AQ96BI3 RNF165-205ENST00000588679 2904 ntBASIC17.34■□□□□ 0.37
APH1AQ96BI3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 KRT18P16-201ENST00000510337 1294 ntBASIC17.34■□□□□ 0.37
APH1AQ96BI3 AC008550.1-201ENST00000511500 884 ntBASIC17.34■□□□□ 0.37
APH1AQ96BI3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
APH1AQ96BI3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
APH1AQ96BI3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms