Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.88■□□□□ 0.93
DDX1Q92499 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX1Q92499 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX1Q92499 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX1Q92499 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX1Q92499 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX1Q92499 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX1Q92499 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX1Q92499 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
DDX1Q92499 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX1Q92499 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX1Q92499 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX1Q92499 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DDX1Q92499 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX1Q92499 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX1Q92499 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX1Q92499 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX1Q92499 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 AL359736.2-201ENST00000621992 437 ntBASIC20.87■□□□□ 0.93
DDX1Q92499 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX1Q92499 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX1Q92499 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX1Q92499 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
DDX1Q92499 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
DDX1Q92499 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX1Q92499 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX1Q92499 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX1Q92499 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
DDX1Q92499 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.86■□□□□ 0.93
DDX1Q92499 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.86■□□□□ 0.93
DDX1Q92499 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
DDX1Q92499 AC008403.3-201ENST00000598924 454 ntBASIC20.86■□□□□ 0.93
DDX1Q92499 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX1Q92499 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DDX1Q92499 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX1Q92499 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
DDX1Q92499 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DDX1Q92499 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
DDX1Q92499 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.86■□□□□ 0.93
DDX1Q92499 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
DDX1Q92499 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
DDX1Q92499 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX1Q92499 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX1Q92499 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX1Q92499 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX1Q92499 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX1Q92499 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX1Q92499 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX1Q92499 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX1Q92499 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX1Q92499 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX1Q92499 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
DDX1Q92499 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.85■□□□□ 0.93
DDX1Q92499 FAM197Y4-202ENST00000622692 608 ntBASIC20.85■□□□□ 0.93
DDX1Q92499 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX1Q92499 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DDX1Q92499 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX1Q92499 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX1Q92499 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX1Q92499 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX1Q92499 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX1Q92499 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DDX1Q92499 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX1Q92499 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX1Q92499 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DDX1Q92499 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX1Q92499 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX1Q92499 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DDX1Q92499 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX1Q92499 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
DDX1Q92499 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX1Q92499 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX1Q92499 AL121906.2-201ENST00000621597 723 ntBASIC20.84■□□□□ 0.93
DDX1Q92499 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX1Q92499 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX1Q92499 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX1Q92499 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DDX1Q92499 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX1Q92499 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms