Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 AC092338.2-201ENST00000568827 1415 ntBASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 FAM8A6P-201ENST00000407496 1135 ntBASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RAPGEF4Q8WZA2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 YBX1P2-201ENST00000489612 999 ntBASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 AL358472.4-201ENST00000633140 710 ntBASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAPGEF4Q8WZA2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 AC091076.1-201ENST00000610741 619 ntBASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 AL023803.3-201ENST00000615559 522 ntBASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 MYC-208ENST00000641036 567 ntBASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF4Q8WZA2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 TSPY17P-201ENST00000450329 467 ntBASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 COX11P1-201ENST00000489116 835 ntBASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 AL160286.2-201ENST00000567150 934 ntBASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF4Q8WZA2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.7■■□□□ 1.71
RAPGEF4Q8WZA2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RAPGEF4Q8WZA2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 TSPY5P-201ENST00000426936 936 ntBASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 UPK3BP1-201ENST00000428678 509 ntBASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
RAPGEF4Q8WZA2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 AP001271.2-201ENST00000624018 1556 ntBASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 AC141257.4-201ENST00000634557 245 ntBASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 AC136944.6-201ENST00000634818 245 ntBASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms