Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 AC124283.5-201ENST00000624661 1809 ntBASIC19.11■□□□□ 0.65
ATL1Q8WXF7 TREX1-205ENST00000625293 1783 ntBASIC19.11■□□□□ 0.65
ATL1Q8WXF7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATL1Q8WXF7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATL1Q8WXF7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 RNA5SP413-201ENST00000516373 109 ntBASIC19.09■□□□□ 0.65
ATL1Q8WXF7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATL1Q8WXF7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
ATL1Q8WXF7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATL1Q8WXF7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATL1Q8WXF7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATL1Q8WXF7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATL1Q8WXF7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.08■□□□□ 0.65
ATL1Q8WXF7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.08■□□□□ 0.65
ATL1Q8WXF7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.08■□□□□ 0.65
ATL1Q8WXF7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 POM121L13P-201ENST00000422362 380 ntBASIC19.08■□□□□ 0.64
ATL1Q8WXF7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 AP006587.1-201ENST00000534129 1502 ntBASIC19.08■□□□□ 0.64
ATL1Q8WXF7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 AL158211.5-201ENST00000623583 2518 ntBASIC19.08■□□□□ 0.64
ATL1Q8WXF7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATL1Q8WXF7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATL1Q8WXF7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms