Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 AL355802.2-201ENST00000402069 882 ntBASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 AIRN-201ENST00000601203 4374 ntBASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCHCR1Q8TD31 KRT17P1-201ENST00000399211 1546 ntBASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 AC092118.2-201ENST00000613495 667 ntBASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCHCR1Q8TD31 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 AC133041.1-202ENST00000642053 222 ntBASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.36■□□□□ 0.85
CCHCR1Q8TD31 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 AL138781.1-201ENST00000566567 1274 ntBASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 AC142086.2-201ENST00000569753 217 ntBASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms