Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 FAM8A6P-201ENST00000407496 1135 ntBASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 SLC25A1P2-201ENST00000430693 912 ntBASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPOQ8N3V7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 AC004951.3-201ENST00000418645 1148 ntBASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 AC011298.2-201ENST00000617989 482 ntBASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 AC010653.2-201ENST00000623505 997 ntBASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 AC096733.2-201ENST00000609937 1394 ntBASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 RCC2P6-201ENST00000526625 1557 ntBASIC19.91■□□□□ 0.78
SYNPOQ8N3V7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 RNF152P1-201ENST00000397754 604 ntBASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 AC073130.3-201ENST00000624389 2278 ntBASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 SLC25A24-204ENST00000569674 2357 ntBASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPOQ8N3V7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 DPP3P2-201ENST00000416030 1696 ntBASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 AC091390.4-202ENST00000476426 537 ntBASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 AL138966.2-201ENST00000621997 464 ntBASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNPOQ8N3V7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPOQ8N3V7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms