Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 RBM17P1-201ENST00000453646 1190 ntBASIC30.74■■■□□ 2.51
VPS8Q8N3P4 B3GAT3P1-201ENST00000471720 806 ntBASIC30.74■■■□□ 2.51
VPS8Q8N3P4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
VPS8Q8N3P4 AL031985.4-201ENST00000642138 673 ntBASIC30.73■■■□□ 2.51
VPS8Q8N3P4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
VPS8Q8N3P4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 RCC2P6-201ENST00000526625 1557 ntBASIC30.71■■■□□ 2.51
VPS8Q8N3P4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
VPS8Q8N3P4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC30.7■■■□□ 2.51
VPS8Q8N3P4 AC079598.2-202ENST00000546624 1451 ntBASIC30.7■■■□□ 2.51
VPS8Q8N3P4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
VPS8Q8N3P4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
VPS8Q8N3P4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
VPS8Q8N3P4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
VPS8Q8N3P4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
VPS8Q8N3P4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
VPS8Q8N3P4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.5
VPS8Q8N3P4 AL355355.2-201ENST00000442321 338 ntBASIC30.7■■■□□ 2.5
VPS8Q8N3P4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC30.7■■■□□ 2.5
VPS8Q8N3P4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.7■■■□□ 2.5
VPS8Q8N3P4 AC073912.3-201ENST00000624414 853 ntBASIC30.7■■■□□ 2.5
VPS8Q8N3P4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
VPS8Q8N3P4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
VPS8Q8N3P4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC30.7■■■□□ 2.5
VPS8Q8N3P4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
VPS8Q8N3P4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 GXYLT1P3-201ENST00000453058 1193 ntBASIC30.69■■■□□ 2.5
VPS8Q8N3P4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 DGCR10-201ENST00000609839 495 ntBASIC30.69■■■□□ 2.5
VPS8Q8N3P4 MIR6786-201ENST00000616843 113 ntBASIC30.69■■■□□ 2.5
VPS8Q8N3P4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
VPS8Q8N3P4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 TREX1-205ENST00000625293 1783 ntBASIC30.68■■■□□ 2.5
VPS8Q8N3P4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 AC011506.1-201ENST00000474329 610 ntBASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms