Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.07■□□□□ 0.8
SIX5Q8N196 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.07■□□□□ 0.8
SIX5Q8N196 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIX5Q8N196 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIX5Q8N196 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.07■□□□□ 0.8
SIX5Q8N196 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIX5Q8N196 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
SIX5Q8N196 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIX5Q8N196 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SIX5Q8N196 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.07■□□□□ 0.8
SIX5Q8N196 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SIX5Q8N196 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIX5Q8N196 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.06■□□□□ 0.8
SIX5Q8N196 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SIX5Q8N196 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIX5Q8N196 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SIX5Q8N196 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIX5Q8N196 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.06■□□□□ 0.8
SIX5Q8N196 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIX5Q8N196 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIX5Q8N196 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.06■□□□□ 0.8
SIX5Q8N196 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.06■□□□□ 0.8
SIX5Q8N196 AL031432.5-201ENST00000641059 760 ntBASIC20.06■□□□□ 0.8
SIX5Q8N196 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SIX5Q8N196 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIX5Q8N196 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIX5Q8N196 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIX5Q8N196 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SIX5Q8N196 AC116351.2-201ENST00000606540 1585 ntBASIC20.05■□□□□ 0.8
SIX5Q8N196 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.05■□□□□ 0.8
SIX5Q8N196 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.05■□□□□ 0.8
SIX5Q8N196 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SIX5Q8N196 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.05■□□□□ 0.8
SIX5Q8N196 AL691432.3-201ENST00000621860 400 ntBASIC20.05■□□□□ 0.8
SIX5Q8N196 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SIX5Q8N196 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SIX5Q8N196 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIX5Q8N196 AC121338.2-201ENST00000622535 1744 ntBASIC20.05■□□□□ 0.8
SIX5Q8N196 AC005332.1-201ENST00000577698 1310 ntBASIC20.04■□□□□ 0.8
SIX5Q8N196 TFP1-202ENST00000475455 1573 ntBASIC20.04■□□□□ 0.8
SIX5Q8N196 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.04■□□□□ 0.8
SIX5Q8N196 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.04■□□□□ 0.8
SIX5Q8N196 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SIX5Q8N196 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.04■□□□□ 0.8
SIX5Q8N196 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SIX5Q8N196 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SIX5Q8N196 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 AC140113.3-201ENST00000605663 199 ntBASIC20.04■□□□□ 0.8
SIX5Q8N196 AC069148.1-201ENST00000608741 768 ntBASIC20.04■□□□□ 0.8
SIX5Q8N196 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.04■□□□□ 0.8
SIX5Q8N196 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.04■□□□□ 0.8
SIX5Q8N196 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.04■□□□□ 0.8
SIX5Q8N196 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIX5Q8N196 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SIX5Q8N196 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 AC092338.2-201ENST00000568827 1415 ntBASIC20.03■□□□□ 0.8
SIX5Q8N196 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SIX5Q8N196 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.03■□□□□ 0.8
SIX5Q8N196 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SIX5Q8N196 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.03■□□□□ 0.8
SIX5Q8N196 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.03■□□□□ 0.8
SIX5Q8N196 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.03■□□□□ 0.8
SIX5Q8N196 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIX5Q8N196 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SIX5Q8N196 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms