Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 AC091390.4-202ENST00000476426 537 ntBASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 HLA-A-209ENST00000638375 975 ntBASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 PHGDH-210ENST00000641115 1638 ntBASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 RNF152P1-201ENST00000397754 604 ntBASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 CCR12P-201ENST00000446203 998 ntBASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 FAM207BP-201ENST00000447172 505 ntBASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 AL138966.2-201ENST00000621997 464 ntBASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEFF1Q8IYR6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 YBX1P2-201ENST00000489612 999 ntBASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEFF1Q8IYR6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 AL031133.1-201ENST00000406807 723 ntBASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 FAM8A6P-201ENST00000407496 1135 ntBASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 MYC-208ENST00000641036 567 ntBASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 AC006128.1-201ENST00000624704 1661 ntBASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEFF1Q8IYR6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms