Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 YBX1P10-201ENST00000444752 975 ntBASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC65Q8IXS2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC65Q8IXS2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 KRT17P3-201ENST00000420566 1262 ntBASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC65Q8IXS2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 PRKY-204ENST00000533551 1019 ntBASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC65Q8IXS2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms