Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 AL023803.3-201ENST00000615559 522 ntBASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS4Q8IUM7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 TSPY17P-201ENST00000450329 467 ntBASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 YBX1P2-201ENST00000489612 999 ntBASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 AL160286.2-201ENST00000567150 934 ntBASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 AC091076.1-201ENST00000610741 619 ntBASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 MYC-208ENST00000641036 567 ntBASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 AP001271.2-201ENST00000624018 1556 ntBASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS4Q8IUM7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 COX11P1-201ENST00000489116 835 ntBASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.03■□□□□ 0.96
NPAS4Q8IUM7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 AL358472.4-201ENST00000633140 710 ntBASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.02■□□□□ 0.96
NPAS4Q8IUM7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 TSPY5P-201ENST00000426936 936 ntBASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 AL353719.1-201ENST00000566847 864 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms