Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 AL138781.1-201ENST00000566567 1274 ntBASIC18.1■□□□□ 0.49
VRK2Q86Y07 MYC-209ENST00000641252 345 ntBASIC18.1■□□□□ 0.49
VRK2Q86Y07 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
VRK2Q86Y07 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK2Q86Y07 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 AC097658.1-201ENST00000475555 843 ntBASIC18.09■□□□□ 0.49
VRK2Q86Y07 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.09■□□□□ 0.49
VRK2Q86Y07 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK2Q86Y07 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VRK2Q86Y07 AC092368.3-202ENST00000574180 1591 ntBASIC18.08■□□□□ 0.49
VRK2Q86Y07 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.08■□□□□ 0.49
VRK2Q86Y07 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VRK2Q86Y07 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VRK2Q86Y07 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VRK2Q86Y07 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.08■□□□□ 0.49
VRK2Q86Y07 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
VRK2Q86Y07 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.08■□□□□ 0.49
VRK2Q86Y07 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.08■□□□□ 0.49
VRK2Q86Y07 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.08■□□□□ 0.48
VRK2Q86Y07 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VRK2Q86Y07 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.08■□□□□ 0.48
VRK2Q86Y07 RPS2P52-201ENST00000469610 820 ntBASIC18.08■□□□□ 0.48
VRK2Q86Y07 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VRK2Q86Y07 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.08■□□□□ 0.48
VRK2Q86Y07 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.08■□□□□ 0.48
VRK2Q86Y07 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.08■□□□□ 0.48
VRK2Q86Y07 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK2Q86Y07 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK2Q86Y07 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK2Q86Y07 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VRK2Q86Y07 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK2Q86Y07 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK2Q86Y07 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK2Q86Y07 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 AL109923.1-201ENST00000618799 583 ntBASIC18.07■□□□□ 0.48
VRK2Q86Y07 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VRK2Q86Y07 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms