Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 MFSD11-216ENST00000590393 1141 ntBASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 AL049812.1-201ENST00000432563 2267 ntBASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRTM1Q86UE6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 RARRES2P4-201ENST00000514074 484 ntBASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 AC013268.1-206ENST00000638368 961 ntBASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 AC112229.1-201ENST00000639295 961 ntBASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 AIRN-201ENST00000601203 4374 ntBASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 AC006333.2-201ENST00000607957 2099 ntBASIC16.97■□□□□ 0.31
LRRTM1Q86UE6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 KRT18P68-201ENST00000392293 1000 ntBASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.96■□□□□ 0.31
LRRTM1Q86UE6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRTM1Q86UE6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms