Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 AC142381.4-202ENST00000563973 229 ntBASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP1BQ7LBR1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 AC092720.2-201ENST00000602388 1665 ntBASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CHMP1BQ7LBR1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 AL158047.1-201ENST00000445918 881 ntBASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 AC120498.8-201ENST00000614275 531 ntBASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 FAM197Y4-202ENST00000622692 608 ntBASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHMP1BQ7LBR1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 PRORSD1P-201ENST00000295112 541 ntBASIC18■□□□□ 0.47
CHMP1BQ7LBR1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 AP006294.2-201ENST00000641667 209 ntBASIC18■□□□□ 0.47
CHMP1BQ7LBR1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHMP1BQ7LBR1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP1BQ7LBR1 KRT8P20-201ENST00000423953 1409 ntBASIC17.99■□□□□ 0.47
CHMP1BQ7LBR1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP1BQ7LBR1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms