Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 ESRRAP1-201ENST00000400596 1257 ntBASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 Z82202.1-201ENST00000623446 1880 ntBASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
COLCA1Q6ZS62 KRT8P8-201ENST00000434750 1448 ntBASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 AC005332.7-201ENST00000614046 2005 ntBASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 CD99P1-205ENST00000527459 561 ntBASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 PRKY-204ENST00000533551 1019 ntBASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COLCA1Q6ZS62 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COLCA1Q6ZS62 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 TUBB8P6-201ENST00000436895 1288 ntBASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 AC233263.1-201ENST00000578059 224 ntBASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms