Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CNKSR3Q6P9H4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNKSR3Q6P9H4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 AC008622.2-201ENST00000617006 1229 ntBASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 AL023973.1-201ENST00000624619 620 ntBASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNKSR3Q6P9H4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 AC093458.2-201ENST00000623150 629 ntBASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNKSR3Q6P9H4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.12■□□□□ 0.97
CNKSR3Q6P9H4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 AC005332.1-201ENST00000577698 1310 ntBASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 AP003041.3-201ENST00000527151 707 ntBASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 CKBP1-201ENST00000565489 1086 ntBASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 AC116407.4-201ENST00000623319 1061 ntBASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CNKSR3Q6P9H4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 TPM4P1-201ENST00000436100 807 ntBASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 DUSP5P1-201ENST00000441325 1139 ntBASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 PRSS44-201ENST00000515154 1146 ntBASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms