Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 AL161938.1-201ENST00000569833 2180 ntBASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00242Q5T6M2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 AC026471.1-201ENST00000564629 3026 ntBASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 MCRIP2P1-201ENST00000394346 511 ntBASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 AC016405.3-201ENST00000607710 860 ntBASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 AC010536.3-201ENST00000620306 533 ntBASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 AC007613.1-201ENST00000572811 2597 ntBASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms