Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 AC008694.1-202ENST00000636953 945 ntBASIC18.79■□□□□ 0.6
PDCD4Q53EL6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
PDCD4Q53EL6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
PDCD4Q53EL6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 AC016769.1-201ENST00000409132 1010 ntBASIC18.77■□□□□ 0.6
PDCD4Q53EL6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 MIR6821-201ENST00000617625 74 ntBASIC18.77■□□□□ 0.6
PDCD4Q53EL6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PDCD4Q53EL6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDCD4Q53EL6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDCD4Q53EL6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDCD4Q53EL6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDCD4Q53EL6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDCD4Q53EL6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms