Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 TSPY20P-201ENST00000450910 630 ntBASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 AC093484.2-201ENST00000580996 2166 ntBASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 AC128676.1-201ENST00000454392 318 ntBASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 KRT18P16-201ENST00000510337 1294 ntBASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 PRKY-204ENST00000533551 1019 ntBASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN20Q4JDL3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 AC007952.6-201ENST00000573168 2673 ntBASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 AC003957.1-201ENST00000625108 2673 ntBASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 Z82202.1-201ENST00000623446 1880 ntBASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 AL023875.1-201ENST00000640777 796 ntBASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN20Q4JDL3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 NBPF21P-201ENST00000425093 1451 ntBASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms