Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC34.7■■■■□ 3.14
HMGXB3Q12766 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC34.7■■■■□ 3.14
HMGXB3Q12766 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC34.7■■■■□ 3.14
HMGXB3Q12766 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.14
HMGXB3Q12766 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC34.69■■■■□ 3.14
HMGXB3Q12766 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC34.69■■■■□ 3.14
HMGXB3Q12766 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 AL160286.2-201ENST00000567150 934 ntBASIC34.69■■■■□ 3.14
HMGXB3Q12766 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC34.69■■■■□ 3.14
HMGXB3Q12766 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC34.69■■■■□ 3.14
HMGXB3Q12766 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
HMGXB3Q12766 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
HMGXB3Q12766 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
HMGXB3Q12766 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC34.68■■■■□ 3.14
HMGXB3Q12766 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
HMGXB3Q12766 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC34.68■■■■□ 3.14
HMGXB3Q12766 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC34.68■■■■□ 3.14
HMGXB3Q12766 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC34.68■■■■□ 3.14
HMGXB3Q12766 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC34.68■■■■□ 3.14
HMGXB3Q12766 TERT-206ENST00000508104 2486 ntTSL 5 BASIC34.68■■■■□ 3.14
HMGXB3Q12766 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
HMGXB3Q12766 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
HMGXB3Q12766 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
HMGXB3Q12766 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC34.67■■■■□ 3.14
HMGXB3Q12766 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
HMGXB3Q12766 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
HMGXB3Q12766 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
HMGXB3Q12766 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC34.66■■■■□ 3.14
HMGXB3Q12766 UNC93B7-201ENST00000509439 705 ntBASIC34.66■■■■□ 3.14
HMGXB3Q12766 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC34.66■■■■□ 3.14
HMGXB3Q12766 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
HMGXB3Q12766 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
HMGXB3Q12766 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC34.65■■■■□ 3.14
HMGXB3Q12766 WDR6-223ENST00000627177 207 ntTSL 2 BASIC34.65■■■■□ 3.14
HMGXB3Q12766 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
HMGXB3Q12766 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC34.65■■■■□ 3.14
HMGXB3Q12766 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC34.65■■■■□ 3.14
HMGXB3Q12766 AL024507.2-201ENST00000606070 2574 ntBASIC34.65■■■■□ 3.14
HMGXB3Q12766 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
HMGXB3Q12766 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
HMGXB3Q12766 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC34.65■■■■□ 3.14
HMGXB3Q12766 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
HMGXB3Q12766 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC34.65■■■■□ 3.14
HMGXB3Q12766 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC34.65■■■■□ 3.14
HMGXB3Q12766 GPALPP1-207ENST00000611650 899 ntBASIC34.65■■■■□ 3.14
HMGXB3Q12766 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC34.65■■■■□ 3.14
HMGXB3Q12766 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
HMGXB3Q12766 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
HMGXB3Q12766 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC34.64■■■■□ 3.14
HMGXB3Q12766 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC34.64■■■■□ 3.14
HMGXB3Q12766 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
HMGXB3Q12766 AL031008.1-201ENST00000619963 541 ntBASIC34.64■■■■□ 3.14
HMGXB3Q12766 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
HMGXB3Q12766 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
HMGXB3Q12766 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
HMGXB3Q12766 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
HMGXB3Q12766 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
HMGXB3Q12766 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC34.63■■■■□ 3.13
HMGXB3Q12766 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
HMGXB3Q12766 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
HMGXB3Q12766 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC34.62■■■■□ 3.13
HMGXB3Q12766 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
HMGXB3Q12766 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC34.62■■■■□ 3.13
HMGXB3Q12766 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC34.62■■■■□ 3.13
HMGXB3Q12766 AL022342.1-201ENST00000400363 863 ntBASIC34.62■■■■□ 3.13
HMGXB3Q12766 NME1-207ENST00000480143 964 ntTSL 2 BASIC34.62■■■■□ 3.13
HMGXB3Q12766 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC34.62■■■■□ 3.13
HMGXB3Q12766 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC34.62■■■■□ 3.13
HMGXB3Q12766 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
HMGXB3Q12766 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC34.62■■■■□ 3.13
HMGXB3Q12766 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
HMGXB3Q12766 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC34.61■■■■□ 3.13
HMGXB3Q12766 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC34.61■■■■□ 3.13
HMGXB3Q12766 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC34.61■■■■□ 3.13
HMGXB3Q12766 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC34.61■■■■□ 3.13
HMGXB3Q12766 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC34.61■■■■□ 3.13
HMGXB3Q12766 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
HMGXB3Q12766 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
HMGXB3Q12766 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC34.61■■■■□ 3.13
HMGXB3Q12766 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
HMGXB3Q12766 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 AC009078.2-202ENST00000463353 338 ntBASIC34.6■■■■□ 3.13
HMGXB3Q12766 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 MIR4674-201ENST00000582457 87 ntBASIC34.6■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms