Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 Z82202.1-201ENST00000623446 1880 ntBASIC17.12■□□□□ 0.33
HIST1H3AP68431 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 UNC93B5-201ENST00000530315 699 ntBASIC17.12■□□□□ 0.33
HIST1H3AP68431 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H3AP68431 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST1H3AP68431 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
HIST1H3AP68431 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HIST1H3AP68431 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.11■□□□□ 0.33
HIST1H3AP68431 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.11■□□□□ 0.33
HIST1H3AP68431 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.11■□□□□ 0.33
HIST1H3AP68431 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HIST1H3AP68431 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.11■□□□□ 0.33
HIST1H3AP68431 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.11■□□□□ 0.33
HIST1H3AP68431 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST1H3AP68431 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 YBX1P10-201ENST00000444752 975 ntBASIC17.1■□□□□ 0.33
HIST1H3AP68431 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.1■□□□□ 0.33
HIST1H3AP68431 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST1H3AP68431 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HIST1H3AP68431 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HIST1H3AP68431 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIST1H3AP68431 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms