Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61BP60468 AC018553.1-201ENST00000616682 1458 ntBASIC10.54□□□□□ -0.72
SEC61BP60468 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61BP60468 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61BP60468 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61BP60468 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
SEC61BP60468 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC10.54□□□□□ -0.72
SEC61BP60468 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC10.53□□□□□ -0.72
SEC61BP60468 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
SEC61BP60468 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC10.53□□□□□ -0.72
SEC61BP60468 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC10.53□□□□□ -0.72
SEC61BP60468 SLC25A3P1-201ENST00000443844 931 ntBASIC10.53□□□□□ -0.72
SEC61BP60468 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 AC097488.1-201ENST00000507834 756 ntBASIC10.53□□□□□ -0.72
SEC61BP60468 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC10.53□□□□□ -0.72
SEC61BP60468 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC10.53□□□□□ -0.72
SEC61BP60468 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC10.53□□□□□ -0.72
SEC61BP60468 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC10.53□□□□□ -0.72
SEC61BP60468 GPX4-207ENST00000589115 812 ntTSL 2 BASIC10.53□□□□□ -0.72
SEC61BP60468 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC10.53□□□□□ -0.72
SEC61BP60468 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 FEM1AP4-201ENST00000443167 1987 ntBASIC10.53□□□□□ -0.72
SEC61BP60468 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC10.53□□□□□ -0.72
SEC61BP60468 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
SEC61BP60468 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SEC61BP60468 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC10.53□□□□□ -0.72
SEC61BP60468 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
SEC61BP60468 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61BP60468 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC10.53□□□□□ -0.72
SEC61BP60468 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
SEC61BP60468 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC10.52□□□□□ -0.72
SEC61BP60468 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SEC61BP60468 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SEC61BP60468 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SEC61BP60468 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SEC61BP60468 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC10.52□□□□□ -0.72
SEC61BP60468 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SEC61BP60468 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
SEC61BP60468 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC10.52□□□□□ -0.73
SEC61BP60468 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 STK25-204ENST00000405585 1643 ntTSL 2 BASIC10.52□□□□□ -0.73
SEC61BP60468 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC10.52□□□□□ -0.73
SEC61BP60468 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SEC61BP60468 CRYGFP-201ENST00000418459 633 ntBASIC10.52□□□□□ -0.73
SEC61BP60468 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SEC61BP60468 AL390955.1-201ENST00000428694 934 ntBASIC10.52□□□□□ -0.73
SEC61BP60468 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC10.52□□□□□ -0.73
SEC61BP60468 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC10.52□□□□□ -0.73
SEC61BP60468 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC10.52□□□□□ -0.73
SEC61BP60468 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.52□□□□□ -0.73
SEC61BP60468 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC10.52□□□□□ -0.73
SEC61BP60468 AL445228.2-201ENST00000605589 952 ntBASIC10.52□□□□□ -0.73
SEC61BP60468 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SEC61BP60468 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC10.52□□□□□ -0.73
SEC61BP60468 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SEC61BP60468 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC10.52□□□□□ -0.73
SEC61BP60468 AC005229.4-201ENST00000610085 2198 ntBASIC10.52□□□□□ -0.73
SEC61BP60468 PLK5-205ENST00000642079 1969 ntBASIC10.52□□□□□ -0.73
SEC61BP60468 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SEC61BP60468 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
SEC61BP60468 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SEC61BP60468 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC10.51□□□□□ -0.73
SEC61BP60468 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SEC61BP60468 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC10.51□□□□□ -0.73
SEC61BP60468 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SEC61BP60468 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SEC61BP60468 GOLGA6L3-201ENST00000507199 1679 ntBASIC10.51□□□□□ -0.73
SEC61BP60468 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SEC61BP60468 AL121603.2-201ENST00000557373 2117 ntBASIC10.51□□□□□ -0.73
SEC61BP60468 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SEC61BP60468 TERF1P1-201ENST00000311003 1181 ntBASIC10.51□□□□□ -0.73
SEC61BP60468 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms