Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
CMC4P56277 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.6□□□□□ -0.07
CMC4P56277 PRORSD1P-201ENST00000295112 541 ntBASIC14.6□□□□□ -0.07
CMC4P56277 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CMC4P56277 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.6□□□□□ -0.07
CMC4P56277 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.6□□□□□ -0.07
CMC4P56277 GCSHP5-201ENST00000443090 522 ntBASIC14.6□□□□□ -0.07
CMC4P56277 AL158047.1-201ENST00000445918 881 ntBASIC14.6□□□□□ -0.07
CMC4P56277 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.6□□□□□ -0.07
CMC4P56277 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.6□□□□□ -0.07
CMC4P56277 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CMC4P56277 RARRES2P10-201ENST00000564312 460 ntBASIC14.6□□□□□ -0.07
CMC4P56277 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.6□□□□□ -0.07
CMC4P56277 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.6□□□□□ -0.07
CMC4P56277 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CMC4P56277 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CMC4P56277 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.6□□□□□ -0.07
CMC4P56277 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.6□□□□□ -0.07
CMC4P56277 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.6□□□□□ -0.07
CMC4P56277 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CMC4P56277 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.59□□□□□ -0.07
CMC4P56277 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 KRT8P8-201ENST00000434750 1448 ntBASIC14.59□□□□□ -0.07
CMC4P56277 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CMC4P56277 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.59□□□□□ -0.07
CMC4P56277 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CMC4P56277 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 TCF3P1-201ENST00000423021 1937 ntBASIC14.59□□□□□ -0.07
CMC4P56277 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CMC4P56277 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.59□□□□□ -0.07
CMC4P56277 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.59□□□□□ -0.07
CMC4P56277 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.59□□□□□ -0.07
CMC4P56277 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
CMC4P56277 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.59□□□□□ -0.07
CMC4P56277 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.59□□□□□ -0.07
CMC4P56277 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.59□□□□□ -0.07
CMC4P56277 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CMC4P56277 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CMC4P56277 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CMC4P56277 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CMC4P56277 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CMC4P56277 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.58□□□□□ -0.07
CMC4P56277 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CMC4P56277 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CMC4P56277 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.58□□□□□ -0.07
CMC4P56277 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CMC4P56277 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.58□□□□□ -0.07
CMC4P56277 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CMC4P56277 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CMC4P56277 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
CMC4P56277 AL691432.2-201ENST00000607222 2038 ntBASIC14.58□□□□□ -0.08
CMC4P56277 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CMC4P56277 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CMC4P56277 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CMC4P56277 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
CMC4P56277 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.58□□□□□ -0.08
CMC4P56277 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CMC4P56277 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.58□□□□□ -0.08
CMC4P56277 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.58□□□□□ -0.08
CMC4P56277 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.58□□□□□ -0.08
CMC4P56277 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.58□□□□□ -0.08
CMC4P56277 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.58□□□□□ -0.08
CMC4P56277 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.58□□□□□ -0.08
CMC4P56277 AC233263.1-201ENST00000578059 224 ntBASIC14.58□□□□□ -0.08
CMC4P56277 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.58□□□□□ -0.08
CMC4P56277 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.58□□□□□ -0.08
CMC4P56277 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CMC4P56277 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CMC4P56277 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CMC4P56277 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms