Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PAX9P55771 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
PAX9P55771 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.71■□□□□ 0.11
PAX9P55771 AC090164.3-201ENST00000610780 2143 ntBASIC15.71■□□□□ 0.11
PAX9P55771 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.71■□□□□ 0.11
PAX9P55771 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PAX9P55771 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.71■□□□□ 0.11
PAX9P55771 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.71■□□□□ 0.11
PAX9P55771 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.71■□□□□ 0.11
PAX9P55771 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PAX9P55771 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PAX9P55771 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.71■□□□□ 0.11
PAX9P55771 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.71■□□□□ 0.11
PAX9P55771 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.71■□□□□ 0.11
PAX9P55771 TERF1P2-201ENST00000583350 1212 ntBASIC15.71■□□□□ 0.11
PAX9P55771 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PAX9P55771 WIZP1-201ENST00000531444 2299 ntBASIC15.71■□□□□ 0.11
PAX9P55771 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.71■□□□□ 0.11
PAX9P55771 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.71■□□□□ 0.11
PAX9P55771 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PAX9P55771 AC018470.1-201ENST00000624790 3129 ntBASIC15.71■□□□□ 0.11
PAX9P55771 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.71■□□□□ 0.11
PAX9P55771 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.71■□□□□ 0.1
PAX9P55771 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.71■□□□□ 0.1
PAX9P55771 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PAX9P55771 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PAX9P55771 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
PAX9P55771 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PAX9P55771 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PAX9P55771 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.7■□□□□ 0.1
PAX9P55771 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PAX9P55771 AC004854.2-201ENST00000608450 1441 ntBASIC15.7■□□□□ 0.1
PAX9P55771 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.7■□□□□ 0.1
PAX9P55771 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PAX9P55771 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.7■□□□□ 0.1
PAX9P55771 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.7■□□□□ 0.1
PAX9P55771 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.7■□□□□ 0.1
PAX9P55771 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.7■□□□□ 0.1
PAX9P55771 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.7■□□□□ 0.1
PAX9P55771 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PAX9P55771 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.7■□□□□ 0.1
PAX9P55771 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.69■□□□□ 0.1
PAX9P55771 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PAX9P55771 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PAX9P55771 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PAX9P55771 AL591742.1-201ENST00000604433 565 ntBASIC15.69■□□□□ 0.1
PAX9P55771 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PAX9P55771 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.69■□□□□ 0.1
PAX9P55771 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.69■□□□□ 0.1
PAX9P55771 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PAX9P55771 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.69■□□□□ 0.1
PAX9P55771 AL133373.2-201ENST00000623187 2828 ntBASIC15.69■□□□□ 0.1
PAX9P55771 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.69■□□□□ 0.1
PAX9P55771 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
PAX9P55771 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.69■□□□□ 0.1
PAX9P55771 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.69■□□□□ 0.1
PAX9P55771 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX9P55771 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.69■□□□□ 0.1
PAX9P55771 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PAX9P55771 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms