Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.51■□□□□ 0.55
NR1H2P55055 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.51■□□□□ 0.55
NR1H2P55055 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.51■□□□□ 0.55
NR1H2P55055 KRT18P20-201ENST00000548986 1279 ntBASIC18.51■□□□□ 0.55
NR1H2P55055 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.51■□□□□ 0.55
NR1H2P55055 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.51■□□□□ 0.55
NR1H2P55055 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.51■□□□□ 0.55
NR1H2P55055 UBE2DNL-204ENST00000602536 740 ntBASIC18.51■□□□□ 0.55
NR1H2P55055 AC104771.1-201ENST00000603335 964 ntBASIC18.51■□□□□ 0.55
NR1H2P55055 AL109923.1-201ENST00000618799 583 ntBASIC18.51■□□□□ 0.55
NR1H2P55055 NOC2LP1-202ENST00000452600 2235 ntBASIC18.51■□□□□ 0.55
NR1H2P55055 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.51■□□□□ 0.55
NR1H2P55055 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NR1H2P55055 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NR1H2P55055 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NR1H2P55055 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H2P55055 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.5■□□□□ 0.55
NR1H2P55055 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NR1H2P55055 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H2P55055 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H2P55055 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NR1H2P55055 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H2P55055 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.5■□□□□ 0.55
NR1H2P55055 AC138907.5-202ENST00000569484 235 ntBASIC18.5■□□□□ 0.55
NR1H2P55055 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.5■□□□□ 0.55
NR1H2P55055 MYCNOS-205ENST00000641950 531 ntBASIC18.5■□□□□ 0.55
NR1H2P55055 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H2P55055 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NR1H2P55055 AC090340.1-201ENST00000620778 4980 ntBASIC18.5■□□□□ 0.55
NR1H2P55055 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NR1H2P55055 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NR1H2P55055 AL133373.2-201ENST00000623187 2828 ntBASIC18.5■□□□□ 0.55
NR1H2P55055 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 AP006587.3-201ENST00000525742 1516 ntBASIC18.49■□□□□ 0.55
NR1H2P55055 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 GPX1P1-201ENST00000388829 606 ntBASIC18.49■□□□□ 0.55
NR1H2P55055 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 AC007322.1-201ENST00000426983 750 ntBASIC18.49■□□□□ 0.55
NR1H2P55055 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.49■□□□□ 0.55
NR1H2P55055 AC010141.2-201ENST00000452426 721 ntBASIC18.49■□□□□ 0.55
NR1H2P55055 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.49■□□□□ 0.55
NR1H2P55055 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.49■□□□□ 0.55
NR1H2P55055 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H2P55055 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
NR1H2P55055 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H2P55055 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H2P55055 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NR1H2P55055 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.48■□□□□ 0.55
NR1H2P55055 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H2P55055 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.48■□□□□ 0.55
NR1H2P55055 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H2P55055 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H2P55055 AL355802.2-201ENST00000402069 882 ntBASIC18.48■□□□□ 0.55
NR1H2P55055 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NR1H2P55055 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.48■□□□□ 0.55
NR1H2P55055 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.48■□□□□ 0.55
NR1H2P55055 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
NR1H2P55055 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.48■□□□□ 0.55
NR1H2P55055 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NR1H2P55055 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.48■□□□□ 0.55
NR1H2P55055 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H2P55055 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
NR1H2P55055 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.48■□□□□ 0.55
NR1H2P55055 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H2P55055 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms