Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CACNA2D1P54289 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA2D1P54289 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.77■□□□□ 0.92
CACNA2D1P54289 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA2D1P54289 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.77■□□□□ 0.92
CACNA2D1P54289 AF186192.3-201ENST00000583427 947 ntBASIC20.77■□□□□ 0.92
CACNA2D1P54289 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNA2D1P54289 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA2D1P54289 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.77■□□□□ 0.92
CACNA2D1P54289 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
CACNA2D1P54289 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.77■□□□□ 0.91
CACNA2D1P54289 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CACNA2D1P54289 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CACNA2D1P54289 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CACNA2D1P54289 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.76■□□□□ 0.91
CACNA2D1P54289 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.76■□□□□ 0.91
CACNA2D1P54289 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 AC004264.1-201ENST00000608354 794 ntBASIC20.76■□□□□ 0.91
CACNA2D1P54289 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA2D1P54289 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CACNA2D1P54289 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA2D1P54289 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA2D1P54289 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA2D1P54289 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA2D1P54289 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA2D1P54289 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.75■□□□□ 0.91
CACNA2D1P54289 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA2D1P54289 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA2D1P54289 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA2D1P54289 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 YBX1P10-201ENST00000444752 975 ntBASIC20.74■□□□□ 0.91
CACNA2D1P54289 KRT18P16-201ENST00000510337 1294 ntBASIC20.74■□□□□ 0.91
CACNA2D1P54289 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA2D1P54289 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA2D1P54289 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA2D1P54289 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA2D1P54289 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA2D1P54289 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 PCDHAC2-203ENST00000615316 3011 ntBASIC20.74■□□□□ 0.91
CACNA2D1P54289 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.74■□□□□ 0.91
CACNA2D1P54289 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 AP001271.2-201ENST00000624018 1556 ntBASIC20.73■□□□□ 0.91
CACNA2D1P54289 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CACNA2D1P54289 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA2D1P54289 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms