Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC28.17■■■□□ 2.1
CLTCL1P53675 PALM-208ENST00000592155 2272 ntTSL 4 BASIC28.16■■■□□ 2.1
CLTCL1P53675 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CLTCL1P53675 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CLTCL1P53675 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC28.16■■■□□ 2.1
CLTCL1P53675 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC28.16■■■□□ 2.1
CLTCL1P53675 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CLTCL1P53675 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC28.16■■■□□ 2.1
CLTCL1P53675 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 AK4P3-201ENST00000418260 669 ntBASIC28.15■■■□□ 2.1
CLTCL1P53675 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC28.15■■■□□ 2.1
CLTCL1P53675 NME1-207ENST00000480143 964 ntTSL 2 BASIC28.15■■■□□ 2.1
CLTCL1P53675 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
CLTCL1P53675 AL160286.2-201ENST00000567150 934 ntBASIC28.15■■■□□ 2.1
CLTCL1P53675 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
CLTCL1P53675 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CLTCL1P53675 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CLTCL1P53675 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC28.14■■■□□ 2.1
CLTCL1P53675 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
CLTCL1P53675 AL691432.2-201ENST00000607222 2038 ntBASIC28.14■■■□□ 2.1
CLTCL1P53675 AC092338.2-201ENST00000568827 1415 ntBASIC28.14■■■□□ 2.09
CLTCL1P53675 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC28.14■■■□□ 2.09
CLTCL1P53675 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
CLTCL1P53675 ATP5G1P1-201ENST00000448724 379 ntBASIC28.14■■■□□ 2.09
CLTCL1P53675 AL023803.3-201ENST00000615559 522 ntBASIC28.14■■■□□ 2.09
CLTCL1P53675 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CLTCL1P53675 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
CLTCL1P53675 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CLTCL1P53675 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CLTCL1P53675 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CLTCL1P53675 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC28.13■■■□□ 2.09
CLTCL1P53675 YBX1P2-201ENST00000489612 999 ntBASIC28.13■■■□□ 2.09
CLTCL1P53675 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC28.13■■■□□ 2.09
CLTCL1P53675 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CLTCL1P53675 AC010653.2-201ENST00000623505 997 ntBASIC28.13■■■□□ 2.09
CLTCL1P53675 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CLTCL1P53675 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
CLTCL1P53675 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CLTCL1P53675 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CLTCL1P53675 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC28.12■■■□□ 2.09
CLTCL1P53675 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC28.12■■■□□ 2.09
CLTCL1P53675 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CLTCL1P53675 SLC25A1P2-201ENST00000430693 912 ntBASIC28.12■■■□□ 2.09
CLTCL1P53675 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CLTCL1P53675 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
CLTCL1P53675 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CLTCL1P53675 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CLTCL1P53675 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CLTCL1P53675 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC28.11■■■□□ 2.09
CLTCL1P53675 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC28.11■■■□□ 2.09
CLTCL1P53675 CCR12P-201ENST00000446203 998 ntBASIC28.11■■■□□ 2.09
CLTCL1P53675 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CLTCL1P53675 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
CLTCL1P53675 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC28.11■■■□□ 2.09
CLTCL1P53675 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CLTCL1P53675 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CLTCL1P53675 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CLTCL1P53675 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CLTCL1P53675 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CLTCL1P53675 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CLTCL1P53675 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CLTCL1P53675 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CLTCL1P53675 FAM8A6P-201ENST00000407496 1135 ntBASIC28.1■■■□□ 2.09
CLTCL1P53675 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC28.1■■■□□ 2.09
CLTCL1P53675 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC28.1■■■□□ 2.09
CLTCL1P53675 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC28.1■■■□□ 2.09
CLTCL1P53675 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CLTCL1P53675 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
CLTCL1P53675 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CLTCL1P53675 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC28.1■■■□□ 2.09
CLTCL1P53675 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CLTCL1P53675 GXYLT1P6-201ENST00000456472 1187 ntBASIC28.1■■■□□ 2.09
CLTCL1P53675 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC28.1■■■□□ 2.09
CLTCL1P53675 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CLTCL1P53675 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC28.1■■■□□ 2.09
CLTCL1P53675 AL162377.1-201ENST00000618844 1793 ntBASIC28.1■■■□□ 2.09
CLTCL1P53675 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC28.1■■■□□ 2.09
CLTCL1P53675 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CLTCL1P53675 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC28.09■■■□□ 2.09
CLTCL1P53675 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC28.09■■■□□ 2.09
CLTCL1P53675 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC28.09■■■□□ 2.09
CLTCL1P53675 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CLTCL1P53675 GOLGA2P11-201ENST00000562660 1621 ntBASIC28.09■■■□□ 2.09
CLTCL1P53675 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC28.09■■■□□ 2.09
CLTCL1P53675 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
CLTCL1P53675 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CLTCL1P53675 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC28.09■■■□□ 2.09
CLTCL1P53675 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CLTCL1P53675 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CLTCL1P53675 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC28.09■■■□□ 2.09
CLTCL1P53675 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC28.09■■■□□ 2.09
CLTCL1P53675 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms