Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.68■■□□□ 1.06
GPC3P51654 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.68■■□□□ 1.06
GPC3P51654 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.68■■□□□ 1.06
GPC3P51654 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.68■■□□□ 1.06
GPC3P51654 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
GPC3P51654 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
GPC3P51654 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.68■■□□□ 1.06
GPC3P51654 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.68■■□□□ 1.06
GPC3P51654 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC3P51654 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GPC3P51654 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.67■■□□□ 1.06
GPC3P51654 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.67■■□□□ 1.06
GPC3P51654 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.67■■□□□ 1.06
GPC3P51654 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.67■■□□□ 1.06
GPC3P51654 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.67■■□□□ 1.06
GPC3P51654 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.67■■□□□ 1.06
GPC3P51654 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.67■■□□□ 1.06
GPC3P51654 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.67■■□□□ 1.06
GPC3P51654 CR392000.1-201ENST00000624770 1228 ntBASIC21.67■■□□□ 1.06
GPC3P51654 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.67■■□□□ 1.06
GPC3P51654 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC3P51654 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
GPC3P51654 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC3P51654 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC3P51654 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC3P51654 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC3P51654 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.66■■□□□ 1.06
GPC3P51654 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
GPC3P51654 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC3P51654 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.66■■□□□ 1.06
GPC3P51654 REXO1L10P-201ENST00000615707 1290 ntBASIC21.66■■□□□ 1.06
GPC3P51654 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.66■■□□□ 1.06
GPC3P51654 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
GPC3P51654 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.66■■□□□ 1.06
GPC3P51654 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC3P51654 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC3P51654 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
GPC3P51654 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.66■■□□□ 1.06
GPC3P51654 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC3P51654 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.65■■□□□ 1.06
GPC3P51654 KRT16P1-201ENST00000399124 1418 ntBASIC21.65■■□□□ 1.06
GPC3P51654 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.65■■□□□ 1.06
GPC3P51654 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC3P51654 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.65■■□□□ 1.06
GPC3P51654 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC3P51654 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC3P51654 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC3P51654 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC3P51654 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.65■■□□□ 1.06
GPC3P51654 LINC01023-201ENST00000606054 436 ntBASIC21.65■■□□□ 1.06
GPC3P51654 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC3P51654 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC3P51654 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.65■■□□□ 1.06
GPC3P51654 AC112907.3-201ENST00000577781 2400 ntBASIC21.65■■□□□ 1.06
GPC3P51654 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC3P51654 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.65■■□□□ 1.06
GPC3P51654 TCF3P1-201ENST00000423021 1937 ntBASIC21.65■■□□□ 1.06
GPC3P51654 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GPC3P51654 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
GPC3P51654 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
GPC3P51654 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
GPC3P51654 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.64■■□□□ 1.06
GPC3P51654 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GPC3P51654 TUBB8P6-201ENST00000436895 1288 ntBASIC21.64■■□□□ 1.05
GPC3P51654 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.64■■□□□ 1.05
GPC3P51654 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GPC3P51654 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.64■■□□□ 1.05
GPC3P51654 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.64■■□□□ 1.05
GPC3P51654 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.64■■□□□ 1.05
GPC3P51654 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GPC3P51654 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
GPC3P51654 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GPC3P51654 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GPC3P51654 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.64■■□□□ 1.05
GPC3P51654 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GPC3P51654 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
GPC3P51654 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPC3P51654 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.63■■□□□ 1.05
GPC3P51654 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.63■■□□□ 1.05
GPC3P51654 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms