Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC6A12P48065 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC6A12P48065 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC6A12P48065 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
SLC6A12P48065 KRT18P16-201ENST00000510337 1294 ntBASIC18.92■□□□□ 0.62
SLC6A12P48065 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC6A12P48065 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC6A12P48065 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A12P48065 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A12P48065 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SLC6A12P48065 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC6A12P48065 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A12P48065 AC026366.1-201ENST00000488803 879 ntBASIC18.91■□□□□ 0.62
SLC6A12P48065 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC6A12P48065 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A12P48065 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A12P48065 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A12P48065 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.91■□□□□ 0.62
SLC6A12P48065 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A12P48065 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A12P48065 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC6A12P48065 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A12P48065 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A12P48065 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A12P48065 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A12P48065 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A12P48065 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A12P48065 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A12P48065 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC6A12P48065 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC6A12P48065 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A12P48065 AL032819.2-201ENST00000624543 2162 ntBASIC18.9■□□□□ 0.62
SLC6A12P48065 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A12P48065 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A12P48065 KRT8P8-201ENST00000434750 1448 ntBASIC18.9■□□□□ 0.62
SLC6A12P48065 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SLC6A12P48065 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A12P48065 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A12P48065 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC6A12P48065 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A12P48065 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SLC6A12P48065 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SLC6A12P48065 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A12P48065 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC6A12P48065 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SLC6A12P48065 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A12P48065 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A12P48065 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.89■□□□□ 0.61
SLC6A12P48065 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A12P48065 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SLC6A12P48065 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A12P48065 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC6A12P48065 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A12P48065 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC6A12P48065 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A12P48065 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SLC6A12P48065 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A12P48065 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A12P48065 ZNF815P-204ENST00000434898 1737 ntBASIC18.88■□□□□ 0.61
SLC6A12P48065 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A12P48065 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms