Protein–RNA interactions for Protein: P45378

TNNT3, Troponin T, fast skeletal muscle, humanhuman

Predicted RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3P45378 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.07■□□□□ 0.96
TNNT3P45378 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.07■□□□□ 0.96
TNNT3P45378 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.07■□□□□ 0.96
TNNT3P45378 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TNNT3P45378 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 AC093484.2-201ENST00000580996 2166 ntBASIC21.07■□□□□ 0.96
TNNT3P45378 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNT3P45378 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.07■□□□□ 0.96
TNNT3P45378 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TNNT3P45378 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNT3P45378 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNT3P45378 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNT3P45378 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.06■□□□□ 0.96
TNNT3P45378 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNT3P45378 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.06■□□□□ 0.96
TNNT3P45378 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNT3P45378 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TNNT3P45378 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.06■□□□□ 0.96
TNNT3P45378 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.06■□□□□ 0.96
TNNT3P45378 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNT3P45378 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 AC020916.1-201ENST00000587762 1774 ntBASIC21.05■□□□□ 0.96
TNNT3P45378 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TNNT3P45378 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
TNNT3P45378 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
TNNT3P45378 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.05■□□□□ 0.96
TNNT3P45378 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.05■□□□□ 0.96
TNNT3P45378 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
TNNT3P45378 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNT3P45378 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.05■□□□□ 0.96
TNNT3P45378 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TNNT3P45378 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.04■□□□□ 0.96
TNNT3P45378 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.04■□□□□ 0.96
TNNT3P45378 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.04■□□□□ 0.96
TNNT3P45378 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.04■□□□□ 0.96
TNNT3P45378 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TNNT3P45378 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.04■□□□□ 0.96
TNNT3P45378 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.04■□□□□ 0.96
TNNT3P45378 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNT3P45378 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.03■□□□□ 0.96
TNNT3P45378 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
TNNT3P45378 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.03■□□□□ 0.96
TNNT3P45378 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.03■□□□□ 0.96
TNNT3P45378 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNT3P45378 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms