Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFSF9P41273 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF9P41273 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFSF9P41273 AC125437.2-201ENST00000625180 2167 ntBASIC21.26■□□□□ 0.99
TNFSF9P41273 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF9P41273 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.26■□□□□ 0.99
TNFSF9P41273 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TNFSF9P41273 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.25■□□□□ 0.99
TNFSF9P41273 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TNFSF9P41273 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
TNFSF9P41273 TSPY7P-201ENST00000431358 1114 ntBASIC21.25■□□□□ 0.99
TNFSF9P41273 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFSF9P41273 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.25■□□□□ 0.99
TNFSF9P41273 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.25■□□□□ 0.99
TNFSF9P41273 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFSF9P41273 AL135905.2-201ENST00000584934 1404 ntBASIC21.25■□□□□ 0.99
TNFSF9P41273 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFSF9P41273 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TNFSF9P41273 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.25■□□□□ 0.99
TNFSF9P41273 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF9P41273 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.24■□□□□ 0.99
TNFSF9P41273 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.24■□□□□ 0.99
TNFSF9P41273 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 AFG3L1P-217ENST00000557444 2447 ntBASIC21.24■□□□□ 0.99
TNFSF9P41273 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TNFSF9P41273 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.24■□□□□ 0.99
TNFSF9P41273 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.24■□□□□ 0.99
TNFSF9P41273 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.24■□□□□ 0.99
TNFSF9P41273 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.24■□□□□ 0.99
TNFSF9P41273 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF9P41273 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.24■□□□□ 0.99
TNFSF9P41273 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF9P41273 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF9P41273 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF9P41273 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF9P41273 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFSF9P41273 MIR4497-201ENST00000583208 89 ntBASIC21.23■□□□□ 0.99
TNFSF9P41273 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.23■□□□□ 0.99
TNFSF9P41273 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.23■□□□□ 0.99
TNFSF9P41273 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFSF9P41273 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.23■□□□□ 0.99
TNFSF9P41273 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF9P41273 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF9P41273 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
TNFSF9P41273 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TNFSF9P41273 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF9P41273 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF9P41273 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF9P41273 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFSF9P41273 NIFKP9-201ENST00000419265 221 ntBASIC21.22■□□□□ 0.99
TNFSF9P41273 FAM197Y1-201ENST00000421178 764 ntBASIC21.22■□□□□ 0.99
TNFSF9P41273 AL353807.1-201ENST00000427475 662 ntBASIC21.22■□□□□ 0.99
TNFSF9P41273 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFSF9P41273 AP002982.1-201ENST00000492365 877 ntBASIC21.22■□□□□ 0.99
TNFSF9P41273 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.22■□□□□ 0.99
TNFSF9P41273 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFSF9P41273 AL353708.3-201ENST00000610272 989 ntBASIC21.22■□□□□ 0.99
TNFSF9P41273 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.22■□□□□ 0.99
TNFSF9P41273 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF9P41273 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TNFSF9P41273 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.22■□□□□ 0.99
TNFSF9P41273 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.22■□□□□ 0.99
TNFSF9P41273 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.22■□□□□ 0.99
TNFSF9P41273 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
TNFSF9P41273 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
TNFSF9P41273 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF9P41273 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF9P41273 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF9P41273 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 KRT8P8-201ENST00000434750 1448 ntBASIC21.21■□□□□ 0.99
TNFSF9P41273 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFSF9P41273 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
TNFSF9P41273 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFSF9P41273 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.21■□□□□ 0.99
TNFSF9P41273 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TNFSF9P41273 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms