Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
HADHAP40939 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HADHAP40939 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HADHAP40939 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.79■□□□□ 0.76
HADHAP40939 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.79■□□□□ 0.76
HADHAP40939 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.79■□□□□ 0.76
HADHAP40939 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HADHAP40939 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HADHAP40939 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HADHAP40939 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HADHAP40939 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HADHAP40939 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HADHAP40939 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HADHAP40939 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.78■□□□□ 0.76
HADHAP40939 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HADHAP40939 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.78■□□□□ 0.76
HADHAP40939 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HADHAP40939 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.78■□□□□ 0.76
HADHAP40939 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.78■□□□□ 0.76
HADHAP40939 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.78■□□□□ 0.76
HADHAP40939 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.78■□□□□ 0.76
HADHAP40939 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HADHAP40939 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HADHAP40939 AC116351.2-201ENST00000606540 1585 ntBASIC19.78■□□□□ 0.76
HADHAP40939 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HADHAP40939 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
HADHAP40939 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HADHAP40939 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HADHAP40939 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.77■□□□□ 0.76
HADHAP40939 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.77■□□□□ 0.76
HADHAP40939 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 AC093484.2-201ENST00000580996 2166 ntBASIC19.77■□□□□ 0.76
HADHAP40939 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.77■□□□□ 0.76
HADHAP40939 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.77■□□□□ 0.76
HADHAP40939 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.77■□□□□ 0.76
HADHAP40939 UNC93B5-201ENST00000530315 699 ntBASIC19.77■□□□□ 0.76
HADHAP40939 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HADHAP40939 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.77■□□□□ 0.76
HADHAP40939 SOX15-203ENST00000570788 1093 ntBASIC19.77■□□□□ 0.76
HADHAP40939 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.77■□□□□ 0.76
HADHAP40939 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.77■□□□□ 0.76
HADHAP40939 AC120498.8-201ENST00000614275 531 ntBASIC19.77■□□□□ 0.76
HADHAP40939 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.77■□□□□ 0.76
HADHAP40939 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.77■□□□□ 0.76
HADHAP40939 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HADHAP40939 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HADHAP40939 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.77■□□□□ 0.75
HADHAP40939 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.77■□□□□ 0.75
HADHAP40939 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.77■□□□□ 0.75
HADHAP40939 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
HADHAP40939 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
HADHAP40939 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HADHAP40939 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.76■□□□□ 0.75
HADHAP40939 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.76■□□□□ 0.75
HADHAP40939 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 AC018553.1-201ENST00000616682 1458 ntBASIC19.76■□□□□ 0.75
HADHAP40939 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 RPS2P52-201ENST00000469610 820 ntBASIC19.76■□□□□ 0.75
HADHAP40939 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HADHAP40939 UNC93B4-201ENST00000505679 747 ntBASIC19.76■□□□□ 0.75
HADHAP40939 RNA5SP413-201ENST00000516373 109 ntBASIC19.76■□□□□ 0.75
HADHAP40939 KRT18P6-201ENST00000555540 1265 ntBASIC19.76■□□□□ 0.75
HADHAP40939 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.76■□□□□ 0.75
HADHAP40939 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms