Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SCNN1AP37088 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.42■□□□□ 0.86
SCNN1AP37088 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SCNN1AP37088 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.42■□□□□ 0.86
SCNN1AP37088 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
SCNN1AP37088 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SCNN1AP37088 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCNN1AP37088 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCNN1AP37088 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.41■□□□□ 0.86
SCNN1AP37088 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCNN1AP37088 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCNN1AP37088 PRORSD1P-201ENST00000295112 541 ntBASIC20.41■□□□□ 0.86
SCNN1AP37088 ABHD17AP1-201ENST00000358206 933 ntBASIC20.41■□□□□ 0.86
SCNN1AP37088 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCNN1AP37088 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SCNN1AP37088 RPPH1-201ENST00000516869 333 ntBASIC20.41■□□□□ 0.86
SCNN1AP37088 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.41■□□□□ 0.86
SCNN1AP37088 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.41■□□□□ 0.86
SCNN1AP37088 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.41■□□□□ 0.86
SCNN1AP37088 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCNN1AP37088 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCNN1AP37088 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.41■□□□□ 0.86
SCNN1AP37088 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCNN1AP37088 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SCNN1AP37088 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.41■□□□□ 0.86
SCNN1AP37088 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.41■□□□□ 0.86
SCNN1AP37088 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.41■□□□□ 0.86
SCNN1AP37088 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
SCNN1AP37088 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCNN1AP37088 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.4■□□□□ 0.86
SCNN1AP37088 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
SCNN1AP37088 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.4■□□□□ 0.86
SCNN1AP37088 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.4■□□□□ 0.86
SCNN1AP37088 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.4■□□□□ 0.86
SCNN1AP37088 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.4■□□□□ 0.86
SCNN1AP37088 C1QBPP2-201ENST00000528754 825 ntBASIC20.4■□□□□ 0.86
SCNN1AP37088 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.4■□□□□ 0.86
SCNN1AP37088 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.4■□□□□ 0.86
SCNN1AP37088 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCNN1AP37088 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCNN1AP37088 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCNN1AP37088 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.39■□□□□ 0.86
SCNN1AP37088 ZNF815P-204ENST00000434898 1737 ntBASIC20.39■□□□□ 0.86
SCNN1AP37088 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SCNN1AP37088 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCNN1AP37088 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCNN1AP37088 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCNN1AP37088 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SCNN1AP37088 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.39■□□□□ 0.85
SCNN1AP37088 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCNN1AP37088 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.39■□□□□ 0.85
SCNN1AP37088 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.39■□□□□ 0.85
SCNN1AP37088 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCNN1AP37088 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCNN1AP37088 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SCNN1AP37088 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.39■□□□□ 0.85
SCNN1AP37088 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SCNN1AP37088 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
SCNN1AP37088 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.38■□□□□ 0.85
SCNN1AP37088 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.38■□□□□ 0.85
SCNN1AP37088 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SCNN1AP37088 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SCNN1AP37088 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SCNN1AP37088 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SCNN1AP37088 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.38■□□□□ 0.85
SCNN1AP37088 AL359736.2-201ENST00000621992 437 ntBASIC20.38■□□□□ 0.85
SCNN1AP37088 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.38■□□□□ 0.85
SCNN1AP37088 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCNN1AP37088 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms