Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.94■□□□□ 0.46
SHC1P29353 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SHC1P29353 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 ABHD17AP1-201ENST00000358206 933 ntBASIC17.94■□□□□ 0.46
SHC1P29353 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHC1P29353 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SHC1P29353 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.94■□□□□ 0.46
SHC1P29353 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 AC120498.8-201ENST00000614275 531 ntBASIC17.94■□□□□ 0.46
SHC1P29353 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.94■□□□□ 0.46
SHC1P29353 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 AL691432.2-201ENST00000607222 2038 ntBASIC17.94■□□□□ 0.46
SHC1P29353 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SHC1P29353 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SHC1P29353 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.93■□□□□ 0.46
SHC1P29353 RPS2P52-201ENST00000469610 820 ntBASIC17.93■□□□□ 0.46
SHC1P29353 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.93■□□□□ 0.46
SHC1P29353 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SHC1P29353 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SHC1P29353 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SHC1P29353 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHC1P29353 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SHC1P29353 KRT16P6-202ENST00000425692 1426 ntBASIC17.92■□□□□ 0.46
SHC1P29353 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC1P29353 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.92■□□□□ 0.46
SHC1P29353 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.92■□□□□ 0.46
SHC1P29353 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC1P29353 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC1P29353 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.92■□□□□ 0.46
SHC1P29353 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC1P29353 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.92■□□□□ 0.46
SHC1P29353 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.92■□□□□ 0.46
SHC1P29353 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.92■□□□□ 0.46
SHC1P29353 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC1P29353 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SHC1P29353 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC1P29353 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.91■□□□□ 0.46
SHC1P29353 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC1P29353 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC1P29353 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC1P29353 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC1P29353 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC1P29353 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SHC1P29353 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC1P29353 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHC1P29353 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.91■□□□□ 0.46
SHC1P29353 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHC1P29353 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SHC1P29353 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC1P29353 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.91■□□□□ 0.46
SHC1P29353 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHC1P29353 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.91■□□□□ 0.46
SHC1P29353 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC1P29353 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.91■□□□□ 0.46
SHC1P29353 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC1P29353 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC1P29353 AC006058.3-201ENST00000606217 1069 ntBASIC17.91■□□□□ 0.46
SHC1P29353 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.91■□□□□ 0.46
SHC1P29353 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC1P29353 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC1P29353 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SHC1P29353 AP000974.1-201ENST00000623909 2387 ntBASIC17.91■□□□□ 0.46
SHC1P29353 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms