Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.03■□□□□ 0.96
CD58P19256 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CD58P19256 C1QBPP2-201ENST00000528754 825 ntBASIC21.03■□□□□ 0.96
CD58P19256 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.03■□□□□ 0.96
CD58P19256 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD58P19256 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD58P19256 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD58P19256 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD58P19256 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD58P19256 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CD58P19256 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD58P19256 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CD58P19256 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CD58P19256 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD58P19256 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD58P19256 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD58P19256 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CD58P19256 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.02■□□□□ 0.96
CD58P19256 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.02■□□□□ 0.96
CD58P19256 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD58P19256 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.02■□□□□ 0.96
CD58P19256 KRASP1-201ENST00000407852 552 ntBASIC21.02■□□□□ 0.96
CD58P19256 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.02■□□□□ 0.96
CD58P19256 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.02■□□□□ 0.96
CD58P19256 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.02■□□□□ 0.96
CD58P19256 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.02■□□□□ 0.96
CD58P19256 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CD58P19256 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD58P19256 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CD58P19256 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.02■□□□□ 0.96
CD58P19256 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD58P19256 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD58P19256 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CD58P19256 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CD58P19256 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CD58P19256 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.02■□□□□ 0.95
CD58P19256 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CD58P19256 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CD58P19256 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.01■□□□□ 0.95
CD58P19256 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CD58P19256 AL158211.5-201ENST00000623583 2518 ntBASIC21.01■□□□□ 0.95
CD58P19256 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.01■□□□□ 0.95
CD58P19256 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CD58P19256 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.01■□□□□ 0.95
CD58P19256 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CD58P19256 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CD58P19256 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.01■□□□□ 0.95
CD58P19256 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.01■□□□□ 0.95
CD58P19256 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.01■□□□□ 0.95
CD58P19256 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CD58P19256 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.01■□□□□ 0.95
CD58P19256 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CD58P19256 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CD58P19256 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.01■□□□□ 0.95
CD58P19256 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CD58P19256 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD58P19256 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.01■□□□□ 0.95
CD58P19256 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21■□□□□ 0.95
CD58P19256 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21■□□□□ 0.95
CD58P19256 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
CD58P19256 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21■□□□□ 0.95
CD58P19256 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CD58P19256 F2R-202ENST00000505600 442 ntTSL 2 BASIC21■□□□□ 0.95
CD58P19256 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21■□□□□ 0.95
CD58P19256 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21■□□□□ 0.95
CD58P19256 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CD58P19256 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21■□□□□ 0.95
CD58P19256 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CD58P19256 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 NBPF21P-201ENST00000425093 1451 ntBASIC21■□□□□ 0.95
CD58P19256 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CD58P19256 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21■□□□□ 0.95
CD58P19256 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.99■□□□□ 0.95
CD58P19256 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms