Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 UBE2SP1-201ENST00000450587 669 ntBASIC19.52■□□□□ 0.72
XRCC1P18887 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.52■□□□□ 0.72
XRCC1P18887 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.52■□□□□ 0.72
XRCC1P18887 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
XRCC1P18887 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.52■□□□□ 0.72
XRCC1P18887 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.52■□□□□ 0.72
XRCC1P18887 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.52■□□□□ 0.72
XRCC1P18887 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.52■□□□□ 0.72
XRCC1P18887 MTDHP1-201ENST00000605323 784 ntBASIC19.52■□□□□ 0.72
XRCC1P18887 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
XRCC1P18887 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.52■□□□□ 0.72
XRCC1P18887 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.52■□□□□ 0.72
XRCC1P18887 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
XRCC1P18887 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
XRCC1P18887 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
XRCC1P18887 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.52■□□□□ 0.71
XRCC1P18887 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.52■□□□□ 0.71
XRCC1P18887 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
XRCC1P18887 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
XRCC1P18887 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
XRCC1P18887 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.52■□□□□ 0.71
XRCC1P18887 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
XRCC1P18887 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
XRCC1P18887 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.51■□□□□ 0.71
XRCC1P18887 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 HLA-G-202ENST00000376815 851 ntBASIC19.51■□□□□ 0.71
XRCC1P18887 HLA-G-203ENST00000376818 1127 ntBASIC19.51■□□□□ 0.71
XRCC1P18887 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.51■□□□□ 0.71
XRCC1P18887 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.51■□□□□ 0.71
XRCC1P18887 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
XRCC1P18887 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.51■□□□□ 0.71
XRCC1P18887 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 AC092720.2-201ENST00000602388 1665 ntBASIC19.51■□□□□ 0.71
XRCC1P18887 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.51■□□□□ 0.71
XRCC1P18887 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC1P18887 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.5■□□□□ 0.71
XRCC1P18887 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.5■□□□□ 0.71
XRCC1P18887 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
XRCC1P18887 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.5■□□□□ 0.71
XRCC1P18887 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.5■□□□□ 0.71
XRCC1P18887 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.5■□□□□ 0.71
XRCC1P18887 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.5■□□□□ 0.71
XRCC1P18887 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 KRT8P20-201ENST00000423953 1409 ntBASIC19.5■□□□□ 0.71
XRCC1P18887 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC1P18887 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.49■□□□□ 0.71
XRCC1P18887 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
XRCC1P18887 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 TNXA-203ENST00000507684 2038 ntBASIC19.49■□□□□ 0.71
XRCC1P18887 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.49■□□□□ 0.71
XRCC1P18887 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.49■□□□□ 0.71
XRCC1P18887 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
XRCC1P18887 AL031963.3-201ENST00000606441 850 ntBASIC19.49■□□□□ 0.71
XRCC1P18887 FAM197Y4-202ENST00000622692 608 ntBASIC19.49■□□□□ 0.71
XRCC1P18887 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.49■□□□□ 0.71
XRCC1P18887 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.49■□□□□ 0.71
XRCC1P18887 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
XRCC1P18887 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 AC004408.2-201ENST00000623613 2777 ntBASIC19.49■□□□□ 0.71
XRCC1P18887 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC1P18887 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
XRCC1P18887 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRCC1P18887 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.48■□□□□ 0.71
XRCC1P18887 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.48■□□□□ 0.71
XRCC1P18887 AC093827.2-201ENST00000512654 315 ntBASIC19.48■□□□□ 0.71
XRCC1P18887 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.48■□□□□ 0.71
XRCC1P18887 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms