Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ATF4P18848 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ATF4P18848 NOC2LP2-201ENST00000407594 1944 ntBASIC16.35■□□□□ 0.21
ATF4P18848 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
ATF4P18848 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.35■□□□□ 0.21
ATF4P18848 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATF4P18848 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATF4P18848 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.34■□□□□ 0.21
ATF4P18848 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.34■□□□□ 0.21
ATF4P18848 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
ATF4P18848 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
ATF4P18848 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
ATF4P18848 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.34■□□□□ 0.21
ATF4P18848 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.34■□□□□ 0.21
ATF4P18848 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.34■□□□□ 0.21
ATF4P18848 AL034346.1-201ENST00000568244 1277 ntBASIC16.34■□□□□ 0.21
ATF4P18848 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.34■□□□□ 0.21
ATF4P18848 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.34■□□□□ 0.21
ATF4P18848 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ATF4P18848 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATF4P18848 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
ATF4P18848 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.33■□□□□ 0.21
ATF4P18848 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF4P18848 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
ATF4P18848 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF4P18848 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF4P18848 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF4P18848 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ATF4P18848 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.33■□□□□ 0.21
ATF4P18848 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF4P18848 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.33■□□□□ 0.2
ATF4P18848 AC024257.2-201ENST00000549699 147 ntBASIC16.33■□□□□ 0.2
ATF4P18848 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.33■□□□□ 0.2
ATF4P18848 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.33■□□□□ 0.2
ATF4P18848 SYT6-210ENST00000641643 1587 ntBASIC16.33■□□□□ 0.2
ATF4P18848 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATF4P18848 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF4P18848 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.33■□□□□ 0.2
ATF4P18848 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATF4P18848 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATF4P18848 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATF4P18848 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATF4P18848 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
ATF4P18848 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATF4P18848 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.32■□□□□ 0.2
ATF4P18848 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.32■□□□□ 0.2
ATF4P18848 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.32■□□□□ 0.2
ATF4P18848 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.32■□□□□ 0.2
ATF4P18848 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
ATF4P18848 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.32■□□□□ 0.2
ATF4P18848 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 AC084018.2-201ENST00000613093 2607 ntBASIC16.32■□□□□ 0.2
ATF4P18848 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 AC011298.3-201ENST00000615796 283 ntBASIC16.32■□□□□ 0.2
ATF4P18848 AC135050.7-201ENST00000624508 2218 ntBASIC16.32■□□□□ 0.2
ATF4P18848 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATF4P18848 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATF4P18848 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF4P18848 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF4P18848 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms