Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.49■□□□□ 0.55
NCK1P16333 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.49■□□□□ 0.55
NCK1P16333 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.49■□□□□ 0.55
NCK1P16333 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.49■□□□□ 0.55
NCK1P16333 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.49■□□□□ 0.55
NCK1P16333 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NCK1P16333 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NCK1P16333 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.49■□□□□ 0.55
NCK1P16333 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.49■□□□□ 0.55
NCK1P16333 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.49■□□□□ 0.55
NCK1P16333 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 AC005837.3-201ENST00000612163 286 ntBASIC18.49■□□□□ 0.55
NCK1P16333 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.49■□□□□ 0.55
NCK1P16333 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.49■□□□□ 0.55
NCK1P16333 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.49■□□□□ 0.55
NCK1P16333 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 AL161938.1-201ENST00000569833 2180 ntBASIC18.49■□□□□ 0.55
NCK1P16333 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.49■□□□□ 0.55
NCK1P16333 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NCK1P16333 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NCK1P16333 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCK1P16333 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.48■□□□□ 0.55
NCK1P16333 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.48■□□□□ 0.55
NCK1P16333 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NCK1P16333 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NCK1P16333 KRT19P1-201ENST00000405746 1186 ntBASIC18.48■□□□□ 0.55
NCK1P16333 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NCK1P16333 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 TERF1P5-201ENST00000477545 1207 ntBASIC18.48■□□□□ 0.55
NCK1P16333 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.48■□□□□ 0.55
NCK1P16333 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCK1P16333 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NCK1P16333 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.47■□□□□ 0.55
NCK1P16333 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
NCK1P16333 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.47■□□□□ 0.55
NCK1P16333 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NCK1P16333 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.47■□□□□ 0.55
NCK1P16333 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.47■□□□□ 0.55
NCK1P16333 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.47■□□□□ 0.55
NCK1P16333 PHGDH-210ENST00000641115 1638 ntBASIC18.47■□□□□ 0.55
NCK1P16333 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NCK1P16333 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NCK1P16333 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 LETM1P2-201ENST00000597330 2178 ntBASIC18.47■□□□□ 0.55
NCK1P16333 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.47■□□□□ 0.55
NCK1P16333 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCK1P16333 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.46■□□□□ 0.55
NCK1P16333 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NCK1P16333 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NCK1P16333 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.46■□□□□ 0.55
NCK1P16333 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms