Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 AC004264.1-201ENST00000608354 794 ntBASIC18.62■□□□□ 0.57
ZNF888P0CJ79 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF888P0CJ79 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 KRT18P16-201ENST00000510337 1294 ntBASIC18.61■□□□□ 0.57
ZNF888P0CJ79 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF888P0CJ79 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 TUBB8P6-201ENST00000436895 1288 ntBASIC18.6■□□□□ 0.57
ZNF888P0CJ79 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 SLC25A24-204ENST00000569674 2357 ntBASIC18.6■□□□□ 0.57
ZNF888P0CJ79 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF888P0CJ79 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.59■□□□□ 0.57
ZNF888P0CJ79 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF888P0CJ79 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ZNF888P0CJ79 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF888P0CJ79 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF888P0CJ79 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms