Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RB1P06400 FBXW4P1-201ENST00000426721 2239 ntBASIC20.8■□□□□ 0.92
RB1P06400 EP400NL-214ENST00000641289 2402 ntBASIC20.79■□□□□ 0.92
RB1P06400 KRT8P8-201ENST00000434750 1448 ntBASIC20.79■□□□□ 0.92
RB1P06400 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RB1P06400 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.79■□□□□ 0.92
RB1P06400 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RB1P06400 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.79■□□□□ 0.92
RB1P06400 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
RB1P06400 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RB1P06400 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RB1P06400 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RB1P06400 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RB1P06400 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.78■□□□□ 0.92
RB1P06400 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RB1P06400 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RB1P06400 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RB1P06400 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RB1P06400 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RB1P06400 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.78■□□□□ 0.92
RB1P06400 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RB1P06400 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RB1P06400 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.78■□□□□ 0.92
RB1P06400 AL450487.1-201ENST00000426799 995 ntBASIC20.78■□□□□ 0.92
RB1P06400 DUSP5P1-201ENST00000441325 1139 ntBASIC20.78■□□□□ 0.92
RB1P06400 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.78■□□□□ 0.92
RB1P06400 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.78■□□□□ 0.92
RB1P06400 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.78■□□□□ 0.92
RB1P06400 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RB1P06400 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RB1P06400 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RB1P06400 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.78■□□□□ 0.92
RB1P06400 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.78■□□□□ 0.92
RB1P06400 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RB1P06400 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RB1P06400 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.77■□□□□ 0.92
RB1P06400 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RB1P06400 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RB1P06400 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RB1P06400 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.77■□□□□ 0.92
RB1P06400 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RB1P06400 PRSS44-201ENST00000515154 1146 ntBASIC20.77■□□□□ 0.92
RB1P06400 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.77■□□□□ 0.92
RB1P06400 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.77■□□□□ 0.92
RB1P06400 AL441883.1-201ENST00000566170 1045 ntBASIC20.77■□□□□ 0.92
RB1P06400 AL160286.2-201ENST00000567150 934 ntBASIC20.77■□□□□ 0.92
RB1P06400 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.77■□□□□ 0.92
RB1P06400 AC093458.2-201ENST00000623150 629 ntBASIC20.77■□□□□ 0.92
RB1P06400 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.77■□□□□ 0.92
RB1P06400 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.77■□□□□ 0.91
RB1P06400 AC005332.1-201ENST00000577698 1310 ntBASIC20.77■□□□□ 0.91
RB1P06400 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.77■□□□□ 0.91
RB1P06400 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.76■□□□□ 0.91
RB1P06400 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RB1P06400 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RB1P06400 AL359075.1-203ENST00000462729 1002 ntBASIC20.76■□□□□ 0.91
RB1P06400 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.76■□□□□ 0.91
RB1P06400 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.76■□□□□ 0.91
RB1P06400 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RB1P06400 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.76■□□□□ 0.91
RB1P06400 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.76■□□□□ 0.91
RB1P06400 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.76■□□□□ 0.91
RB1P06400 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RB1P06400 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RB1P06400 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.76■□□□□ 0.91
RB1P06400 FEM1AP4-201ENST00000443167 1987 ntBASIC20.76■□□□□ 0.91
RB1P06400 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RB1P06400 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RB1P06400 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 AC092720.2-201ENST00000602388 1665 ntBASIC20.75■□□□□ 0.91
RB1P06400 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RB1P06400 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.75■□□□□ 0.91
RB1P06400 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.75■□□□□ 0.91
RB1P06400 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.75■□□□□ 0.91
RB1P06400 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.75■□□□□ 0.91
RB1P06400 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RB1P06400 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.75■□□□□ 0.91
RB1P06400 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.75■□□□□ 0.91
RB1P06400 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RB1P06400 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RB1P06400 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RB1P06400 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms