Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DQB2P05538 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.89■□□□□ 0.78
HLA-DQB2P05538 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 AL023875.1-201ENST00000640777 796 ntBASIC19.89■□□□□ 0.77
HLA-DQB2P05538 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DQB2P05538 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DQB2P05538 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 NBPF21P-201ENST00000425093 1451 ntBASIC19.87■□□□□ 0.77
HLA-DQB2P05538 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 FAM201B-201ENST00000458407 597 ntBASIC19.87■□□□□ 0.77
HLA-DQB2P05538 KRT18P16-201ENST00000510337 1294 ntBASIC19.87■□□□□ 0.77
HLA-DQB2P05538 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB2P05538 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 AC239809.2-201ENST00000415381 517 ntBASIC19.86■□□□□ 0.77
HLA-DQB2P05538 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 RN7SL471P-201ENST00000580476 299 ntBASIC19.86■□□□□ 0.77
HLA-DQB2P05538 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB2P05538 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 AC116562.4-201ENST00000641316 2276 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms