Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.5■■□□□ 1.35
APPP05067 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.5■■□□□ 1.35
APPP05067 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
APPP05067 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
APPP05067 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
APPP05067 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
APPP05067 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.49■■□□□ 1.35
APPP05067 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
APPP05067 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.49■■□□□ 1.35
APPP05067 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
APPP05067 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
APPP05067 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
APPP05067 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.49■■□□□ 1.35
APPP05067 AC008550.1-201ENST00000511500 884 ntBASIC23.49■■□□□ 1.35
APPP05067 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.49■■□□□ 1.35
APPP05067 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.49■■□□□ 1.35
APPP05067 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.49■■□□□ 1.35
APPP05067 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.49■■□□□ 1.35
APPP05067 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.49■■□□□ 1.35
APPP05067 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.49■■□□□ 1.35
APPP05067 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
APPP05067 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
APPP05067 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.49■■□□□ 1.35
APPP05067 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
APPP05067 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
APPP05067 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
APPP05067 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
APPP05067 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 AC009237.14-201ENST00000609975 1594 ntBASIC23.48■■□□□ 1.35
APPP05067 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.48■■□□□ 1.35
APPP05067 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
APPP05067 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.48■■□□□ 1.35
APPP05067 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.48■■□□□ 1.35
APPP05067 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 YBX1P10-201ENST00000444752 975 ntBASIC23.48■■□□□ 1.35
APPP05067 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
APPP05067 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.48■■□□□ 1.35
APPP05067 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
APPP05067 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.48■■□□□ 1.35
APPP05067 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.48■■□□□ 1.35
APPP05067 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
APPP05067 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APPP05067 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
APPP05067 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.47■■□□□ 1.35
APPP05067 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.47■■□□□ 1.35
APPP05067 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.47■■□□□ 1.35
APPP05067 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
APPP05067 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
APPP05067 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.47■■□□□ 1.35
APPP05067 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.47■■□□□ 1.35
APPP05067 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
APPP05067 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
APPP05067 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.47■■□□□ 1.35
APPP05067 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
APPP05067 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
APPP05067 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
APPP05067 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
APPP05067 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
APPP05067 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.46■■□□□ 1.35
APPP05067 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
APPP05067 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
APPP05067 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
APPP05067 RPS2P4-201ENST00000476944 856 ntBASIC23.46■■□□□ 1.35
APPP05067 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
APPP05067 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.46■■□□□ 1.35
APPP05067 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
APPP05067 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
APPP05067 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms