Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.12■□□□□ 0.33
LCATP04180 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.12■□□□□ 0.33
LCATP04180 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.12■□□□□ 0.33
LCATP04180 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.12■□□□□ 0.33
LCATP04180 HLA-L-209ENST00000420110 1011 ntBASIC17.12■□□□□ 0.33
LCATP04180 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.12■□□□□ 0.33
LCATP04180 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.12■□□□□ 0.33
LCATP04180 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.12■□□□□ 0.33
LCATP04180 AC060766.5-201ENST00000590539 871 ntBASIC17.12■□□□□ 0.33
LCATP04180 AC083880.1-201ENST00000608266 535 ntBASIC17.12■□□□□ 0.33
LCATP04180 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LCATP04180 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LCATP04180 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LCATP04180 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.12■□□□□ 0.33
LCATP04180 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCATP04180 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LCATP04180 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCATP04180 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCATP04180 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LCATP04180 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.11■□□□□ 0.33
LCATP04180 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LCATP04180 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCATP04180 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.11■□□□□ 0.33
LCATP04180 TREX1-205ENST00000625293 1783 ntBASIC17.11■□□□□ 0.33
LCATP04180 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCATP04180 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.11■□□□□ 0.33
LCATP04180 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.11■□□□□ 0.33
LCATP04180 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCATP04180 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LCATP04180 PNMA6B-201ENST00000538162 1200 ntBASIC17.11■□□□□ 0.33
LCATP04180 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.11■□□□□ 0.33
LCATP04180 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.11■□□□□ 0.33
LCATP04180 AC142086.2-201ENST00000569753 217 ntBASIC17.11■□□□□ 0.33
LCATP04180 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.11■□□□□ 0.33
LCATP04180 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LCATP04180 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LCATP04180 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCATP04180 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.11■□□□□ 0.33
LCATP04180 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.11■□□□□ 0.33
LCATP04180 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
LCATP04180 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.11■□□□□ 0.33
LCATP04180 AC116351.2-201ENST00000606540 1585 ntBASIC17.11■□□□□ 0.33
LCATP04180 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCATP04180 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LCATP04180 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LCATP04180 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.1■□□□□ 0.33
LCATP04180 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.1■□□□□ 0.33
LCATP04180 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.1■□□□□ 0.33
LCATP04180 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.1■□□□□ 0.33
LCATP04180 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.1■□□□□ 0.33
LCATP04180 RPS2P52-201ENST00000469610 820 ntBASIC17.1■□□□□ 0.33
LCATP04180 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.1■□□□□ 0.33
LCATP04180 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.1■□□□□ 0.33
LCATP04180 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.1■□□□□ 0.33
LCATP04180 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LCATP04180 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.1■□□□□ 0.33
LCATP04180 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.1■□□□□ 0.33
LCATP04180 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCATP04180 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LCATP04180 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
LCATP04180 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.09■□□□□ 0.33
LCATP04180 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.09■□□□□ 0.33
LCATP04180 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.09■□□□□ 0.33
LCATP04180 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.09■□□□□ 0.33
LCATP04180 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms