Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQA2P01906 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQA2P01906 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQA2P01906 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.58■□□□□ 0.41
HLA-DQA2P01906 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQA2P01906 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 AC080038.1-201ENST00000611274 1154 ntBASIC17.58■□□□□ 0.4
HLA-DQA2P01906 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.58■□□□□ 0.4
HLA-DQA2P01906 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 PHGDH-210ENST00000641115 1638 ntBASIC17.57■□□□□ 0.4
HLA-DQA2P01906 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DQA2P01906 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 AC023632.3-201ENST00000521633 145 ntBASIC17.56■□□□□ 0.4
HLA-DQA2P01906 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 AL137784.2-201ENST00000607332 1000 ntBASIC17.56■□□□□ 0.4
HLA-DQA2P01906 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 MKRN4P-201ENST00000444706 1521 ntBASIC17.56■□□□□ 0.4
HLA-DQA2P01906 AC093484.2-201ENST00000580996 2166 ntBASIC17.56■□□□□ 0.4
HLA-DQA2P01906 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQA2P01906 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 AC105036.2-201ENST00000569468 176 ntBASIC17.55■□□□□ 0.4
HLA-DQA2P01906 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQA2P01906 IKBKGP1-201ENST00000612193 1073 ntBASIC17.55■□□□□ 0.4
HLA-DQA2P01906 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms