Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TUBB8P6-201ENST00000436895 1288 ntBASIC20.65■□□□□ 0.9
RTN3O95197 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.65■□□□□ 0.9
RTN3O95197 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.65■□□□□ 0.9
RTN3O95197 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.65■□□□□ 0.9
RTN3O95197 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.65■□□□□ 0.9
RTN3O95197 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTN3O95197 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.64■□□□□ 0.9
RTN3O95197 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
RTN3O95197 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.64■□□□□ 0.9
RTN3O95197 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RTN3O95197 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN3O95197 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTN3O95197 AL020996.1-203ENST00000536896 2307 ntBASIC20.64■□□□□ 0.89
RTN3O95197 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.64■□□□□ 0.89
RTN3O95197 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.64■□□□□ 0.89
RTN3O95197 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.64■□□□□ 0.89
RTN3O95197 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.64■□□□□ 0.89
RTN3O95197 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.64■□□□□ 0.89
RTN3O95197 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.64■□□□□ 0.89
RTN3O95197 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTN3O95197 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN3O95197 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.64■□□□□ 0.89
RTN3O95197 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.64■□□□□ 0.89
RTN3O95197 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN3O95197 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN3O95197 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN3O95197 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN3O95197 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RTN3O95197 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTN3O95197 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RTN3O95197 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTN3O95197 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.63■□□□□ 0.89
RTN3O95197 C1QL1P1-201ENST00000568105 661 ntBASIC20.63■□□□□ 0.89
RTN3O95197 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RTN3O95197 CD177P1-201ENST00000606252 935 ntBASIC20.63■□□□□ 0.89
RTN3O95197 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RTN3O95197 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.63■□□□□ 0.89
RTN3O95197 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RTN3O95197 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN3O95197 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN3O95197 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN3O95197 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RTN3O95197 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
RTN3O95197 NIFKP9-201ENST00000419265 221 ntBASIC20.62■□□□□ 0.89
RTN3O95197 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN3O95197 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN3O95197 KSR1P1-201ENST00000446298 240 ntBASIC20.62■□□□□ 0.89
RTN3O95197 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN3O95197 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN3O95197 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.62■□□□□ 0.89
RTN3O95197 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN3O95197 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN3O95197 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN3O95197 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTN3O95197 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTN3O95197 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTN3O95197 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RTN3O95197 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.61■□□□□ 0.89
RTN3O95197 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.61■□□□□ 0.89
RTN3O95197 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN3O95197 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN3O95197 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms