Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG5O95196 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG5O95196 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.02■□□□□ 0.96
CSPG5O95196 EGLN1P1-201ENST00000531623 762 ntBASIC21.02■□□□□ 0.96
CSPG5O95196 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CSPG5O95196 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CSPG5O95196 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CSPG5O95196 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG5O95196 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.02■□□□□ 0.96
CSPG5O95196 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSPG5O95196 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSPG5O95196 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CSPG5O95196 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.01■□□□□ 0.95
CSPG5O95196 AC117947.1-201ENST00000427448 529 ntBASIC21.01■□□□□ 0.95
CSPG5O95196 AC004980.1-204ENST00000429707 299 ntBASIC21.01■□□□□ 0.95
CSPG5O95196 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.01■□□□□ 0.95
CSPG5O95196 AC139887.4-201ENST00000607877 719 ntBASIC21.01■□□□□ 0.95
CSPG5O95196 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.01■□□□□ 0.95
CSPG5O95196 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.01■□□□□ 0.95
CSPG5O95196 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG5O95196 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CSPG5O95196 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CSPG5O95196 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CSPG5O95196 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21■□□□□ 0.95
CSPG5O95196 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21■□□□□ 0.95
CSPG5O95196 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21■□□□□ 0.95
CSPG5O95196 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21■□□□□ 0.95
CSPG5O95196 AL445675.2-201ENST00000620291 557 ntBASIC21■□□□□ 0.95
CSPG5O95196 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21■□□□□ 0.95
CSPG5O95196 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21■□□□□ 0.95
CSPG5O95196 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CSPG5O95196 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG5O95196 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CSPG5O95196 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CSPG5O95196 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CSPG5O95196 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.99■□□□□ 0.95
CSPG5O95196 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 TSPY14P-201ENST00000303979 915 ntBASIC20.99■□□□□ 0.95
CSPG5O95196 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CSPG5O95196 AC128688.1-201ENST00000487626 519 ntBASIC20.99■□□□□ 0.95
CSPG5O95196 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CSPG5O95196 AP005242.2-201ENST00000580065 1175 ntBASIC20.99■□□□□ 0.95
CSPG5O95196 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.99■□□□□ 0.95
CSPG5O95196 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CSPG5O95196 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CSPG5O95196 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG5O95196 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.99■□□□□ 0.95
CSPG5O95196 AC026310.3-201ENST00000625186 2373 ntBASIC20.99■□□□□ 0.95
CSPG5O95196 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
CSPG5O95196 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.98■□□□□ 0.95
CSPG5O95196 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.98■□□□□ 0.95
CSPG5O95196 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CSPG5O95196 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CSPG5O95196 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.98■□□□□ 0.95
CSPG5O95196 AC026271.3-201ENST00000571884 352 ntBASIC20.98■□□□□ 0.95
CSPG5O95196 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms